Gene Nham_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0894 
Symbol 
ID4031386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp987203 
End bp988306 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content56% 
IMG OID637969406 
Productcalcium/proton exchanger 
Protein accessionYP_576216 
Protein GI92116487 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCCC TGCTAAGGGA AATACGACAT ACCCCGTTGC TCTGGTTGCT GATATTTGTG 
CCAGCCGTAC TGATTGCGGC AAGAATTGTG CCTGCCGCTC ACACGCTGCT GTTTGTGTTG
GCAGTCGTGG CAATCGTTCC GCTCGCCGCC CTCCTTAGTC ATGCTACCGA AGCCATCTCT
GAAAAAACGG GTGATGCAGT TGGCGGGTTG CTTAATGCGA CGCTTGGAAA TCTGACAGAG
TTGATTATCG CAGTGACAGC ACTCCATGCT GGAGAGTATA TGCTGGTGAA GGCGTCGATT
GCCGGCGCTA TCGTCACGAA TTCGCTTTTT ATGCTGGGAG CCTCTTTTTT GTTGGGCGGC
CTTCGGTACC ACGTTCAGGA ATACAATCGC GCCGGAGGAA GGATGCATTC GGCGCTGTTG
TTGATGGCGA CGATTGCGTT ACTCGCGCCG GCGGCGGTCT CCGAACTCGA TTTGGCGCGG
GGCGAAGTGA TGACCCAGAA TTTCAGCCTC GCCCTGGCGA TCTTGCTTAT CGTGGCATAC
GGATTGAGCC TGCTATTCTC GCTCAAGACC CATAAGGAGC TTTTTGCGAG CGAAGATCGC
GGCCAGGCGG AGGAGGCAAA GTGGCCGATC AACCTCGCGA TCGGAACACT TTTCGTTGTT
ACGGTGTTGG TGGCGCTGGT GAGCGAAATC TTCGTGGAGT CGGTGCAACA TGCGGCGGCG
ACGCTGGGGA TGAGCCCGGC TTTCGTTGGA TTCATCATTG TAGCCTTGGT CGGTGCTGCG
GCTGAAATGG CGGTAGCATT TTCTGCCGCG CGCAAGAACC GCCTGGATAT GAGCGTCAGT
ATCGCGCTCG GAAGTGCGTC CCAGATCGCG CTATTTGTTG CACCGGTACT TGTACTTCTG
AGCTACGTCG TCGGACCCAA GCCAATGGAT CTGCAGTTTT GGCCGGGTGC AGTGACGATG
GTAATGATCG CTACTGTGAC GGCGACCTTT GTCACGAACA GCGGTCGTTC GGCATGGTTT
ATTGGCGCTC TGCTATTGTT CATCTACGCT GTATTCGCCA TGACCCTCTA CATGGTTCCG
CCTGGATCGC ATGGATCGGT CTGA
 
Protein sequence
MSSLLREIRH TPLLWLLIFV PAVLIAARIV PAAHTLLFVL AVVAIVPLAA LLSHATEAIS 
EKTGDAVGGL LNATLGNLTE LIIAVTALHA GEYMLVKASI AGAIVTNSLF MLGASFLLGG
LRYHVQEYNR AGGRMHSALL LMATIALLAP AAVSELDLAR GEVMTQNFSL ALAILLIVAY
GLSLLFSLKT HKELFASEDR GQAEEAKWPI NLAIGTLFVV TVLVALVSEI FVESVQHAAA
TLGMSPAFVG FIIVALVGAA AEMAVAFSAA RKNRLDMSVS IALGSASQIA LFVAPVLVLL
SYVVGPKPMD LQFWPGAVTM VMIATVTATF VTNSGRSAWF IGALLLFIYA VFAMTLYMVP
PGSHGSV