Gene Nham_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0719 
Symbol 
ID4031518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp794163 
End bp795320 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content60% 
IMG OID637969253 
Producthypothetical protein 
Protein accessionYP_576064 
Protein GI92116335 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.348943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG CGGGCGACCA TCACACCGAA AGGGAGATGC CGTTCGGATT CTGGCGGCGC 
AGCTATGCCA TGCTGGTGAA AGAGTTCATC CAGCTCCGGC GCGACCGGGT GTCGTTCGCG
ATGATCGTGA TGGTTCCGGT GATGCAGCTT CTGCTGTTCG GCTATGCCAT CAACACCACG
CCGCGCCATC TGCCCACCGC CGTTCTGGTG CAGGAGGACA GCGACCTCGC GCGCTCGATA
CTAAAGGCGT TGGAGAACAC ATCCTATTTC CGCTTCACGC AGCAGGTGCA CGACATCGAT
ACCTTCGATA ATCTCCTGAA ATCCGGCGAT GTGCTGTTCG GCATAGAGAT TCCGCGCGGC
TTCGAGCGCG GCGTGCGGCG CGGTGACCGT CCGGCGCTGC TGGTTGCCGC CGATGCCACC
GATCCGGTCG CCGCCGGCTC CGCTTTGAGC GCGCTCGGTC CGATCGTGCA GACCGCGCTC
GCGCACGATC TGTTCATTGG CAGTTCGCCC GATCCGCCAT TCGAAATCCG GGTACATGCA
CGTTTCAATC CCGCGGCGTC CTCGCGGCTG AACATCGTGC CCGGGCTTGT CGGCACCATC
CTCACCATGA CCATGCTGAT CTTCACCGCC TTGTCTGTCA CGCGCGAGAT CGAGCGGGGT
ACTATGGAAA ACCTGCTGTC GATGCCGATC ACGCCGGTAG AGGTGATGAT CGGCAAGATC
CTGCCCTATG TGTTGGTGGG GTTCATCCAG GCGGCGTTGA TCATCGGCAT CGGGGCGCTG
CTGTTCGGCG TTCCCATCGA CGGAAGCATG ACGTTGTTGG CGTTACTGTC GACGCTGTTC
ATCACAACCA ATCTCGCCGT CGGGTACACA TTCTCGACCA TCGTGCAGAA CCAGCTCCAG
GCCATGCAGA TGTCGACGAT GTTCTTCCTG CCAAGCATCC TGCTGTCCGG CTTCATGTTT
CCGTTCTCCG GCATGCCGGT CTGGGCGCAG TATGTTGGGG AATGCCTGCC ACTGACGCAC
TACATTCGGA TTGTTCGCGC CATCATGTTG AAGGGAGCGA CGCTGCAAAA TTTGCAGTAC
GATACCCTTG TGTTGCTGGT GCTGATGCTG GTGGCTATGG TGATCGCAGT GACAAGGTTC
CGCCGCACGC TGGATTAG
 
Protein sequence
MSAAGDHHTE REMPFGFWRR SYAMLVKEFI QLRRDRVSFA MIVMVPVMQL LLFGYAINTT 
PRHLPTAVLV QEDSDLARSI LKALENTSYF RFTQQVHDID TFDNLLKSGD VLFGIEIPRG
FERGVRRGDR PALLVAADAT DPVAAGSALS ALGPIVQTAL AHDLFIGSSP DPPFEIRVHA
RFNPAASSRL NIVPGLVGTI LTMTMLIFTA LSVTREIERG TMENLLSMPI TPVEVMIGKI
LPYVLVGFIQ AALIIGIGAL LFGVPIDGSM TLLALLSTLF ITTNLAVGYT FSTIVQNQLQ
AMQMSTMFFL PSILLSGFMF PFSGMPVWAQ YVGECLPLTH YIRIVRAIML KGATLQNLQY
DTLVLLVLML VAMVIAVTRF RRTLD