Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0615 |
Symbol | |
ID | 4030989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 677143 |
End bp | 678699 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637969147 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_575964 |
Protein GI | 92116235 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0683738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGCGG CCGCCGCACA TCCGGCCGCG GTCCCCGGCC TGCGCCGGAA CATGGTGACG ATCTGCGCGA TGACCGCGAC CATCATGCAG GCGCTCGACA CCACGATCGC CAACGTCGCG CTGCCCTACA TGCAGGGATC GCTGTCGGCG TCGCAGGACC AGATCAACTG GGTGCTGACG TCCTATATCG TAGCGGCGGC GATCATGACC GCGCCGGTCG GCTGGATCGC CAACCGCTTC GGCCGCAAGC GCATCTTCAT CCTCTGCTCC GCCGGGTTCA CCCTCGCATC GGTGATGTGC GGGCTTTCGC AGGACATCAC CCAGATGGTG CTGTTCCGCC TGCTGCAAGG CGTGTTCGGC GCCGCGCTGG TGCCGCTGTC GCAGGCGGTG CTACTCGACA GCTACGCGCT GCACGAGCGC GCCAAGGCGA TGGCGATCTG GGGCATGGGC GTGATGATGG GGCCGATCAT GGGCCCCTCG CTCGGCGCCT GGCTGACCGA GACCTATAGC TGGCACTGGG TCTTCTTCGT CAATCTGCCG TTCGGCCTGA TCACGGTCAT GGGCCTGATC ATCTTCATGG ACGAGACCAG GCTCGATACC AAGCTGCAAT TCGACTGGTT CGGCTTCACC GCGCTCGCCA TCGGCATCGG CGCGCTGCAA CTGGCGCTCG ATCGCGGCGA ACAGCTCGAT TGGCTGGAGT CATGGGAAAT CGTGATCGAG TTCATCGTCT CGGCCGTCGG CTTCTACTAT TTCTTCGCGC ATTCGCTTAC CACGAAGCGC CCGTTCGTCC AGTTCGTGAT CTTCAAGGAT CGCAATTTCG CGACCGCCCT CATTTTCATG GCGGTGATCG GTGTGGTGCT GTTCTCGACC ATGGCGCTGG CCTCGCCGCT ATTCCAGAAC GCCTATGGCT ACCCGATCCT GACCGCCGGT TTTCTGCTCG CAACGCGCGG CATCGGAACG TTTGTGGCCA TGATGATGGT CAGCCGACTC ATGACCACCT TCGAGGCGCG GACCCTGATT GCCGTCGGCC TCTCGCTGAT CGCGATCACG CTCTACGACA TGACCGGCTG GACCGCCGAT ATTTCCGTGC GGGCCATCGC CATCAACAGC ATCGTCCAGG GTTACGGCAT CGGCCTCGTC TTCGTGCCGA TGACCACCGC CGCCTTCATG ACGCTGCCCG ACCATCTGCG CACCGACGGC ACCGCGATGC TGACGCTGGT GCGCAACGTC GCGAGTTCGA TCGGCATTTC CATCGTCATC GCGCGACTGA CGAGCGGAAC CATTCGCGTC CATGCCGTGC TGGCCGAGCA CATCAACCCG TTCAACGACG CATTGCAGAT GCCGAACGTC GCCGGCGCCA TCAACCTGAA CACCGACATG GGCCGTGCGA TGATGGATCT GATCGTCAGT ACGCAGGCGC AGATCATCGC CTTCTCGCAG GACTTCGAAC TGGTCGCGCT GGTGACGATC TGCGCGATTC CGCTGGTGCT GATGCTGAAA TCGACCAAGG CGGCGATGCG CGCGCCGTCC ACGGATCATG CCACGGTGAT GGAATAG
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Protein sequence | MPAAAAHPAA VPGLRRNMVT ICAMTATIMQ ALDTTIANVA LPYMQGSLSA SQDQINWVLT SYIVAAAIMT APVGWIANRF GRKRIFILCS AGFTLASVMC GLSQDITQMV LFRLLQGVFG AALVPLSQAV LLDSYALHER AKAMAIWGMG VMMGPIMGPS LGAWLTETYS WHWVFFVNLP FGLITVMGLI IFMDETRLDT KLQFDWFGFT ALAIGIGALQ LALDRGEQLD WLESWEIVIE FIVSAVGFYY FFAHSLTTKR PFVQFVIFKD RNFATALIFM AVIGVVLFST MALASPLFQN AYGYPILTAG FLLATRGIGT FVAMMMVSRL MTTFEARTLI AVGLSLIAIT LYDMTGWTAD ISVRAIAINS IVQGYGIGLV FVPMTTAAFM TLPDHLRTDG TAMLTLVRNV ASSIGISIVI ARLTSGTIRV HAVLAEHINP FNDALQMPNV AGAINLNTDM GRAMMDLIVS TQAQIIAFSQ DFELVALVTI CAIPLVLMLK STKAAMRAPS TDHATVME
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