Gene Nham_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0551 
Symbol 
ID4031299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp610806 
End bp611621 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content62% 
IMG OID637969081 
Producthypothetical protein 
Protein accessionYP_575901 
Protein GI92116172 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGACT TAGACCGTAA CTATACATCT CCGTTTGGCC GGGCCGCAGG GCGCGTTGAT 
CGCGCGGCCG TCGACGCCGG TCTGCGGTCC TATATGCTCA AGATCTACAA CTACATGTCG
ATCGGTCTTG CCATCACCGG CCTGGCCGCG CTCGGCGTCT ACATGTTCGC CGTGACGGGT
GACGCTACCC TTGCAGCCAA GTCGGCGACA GGTGCTTCGC TCGCCCTGAA GGGCGGCCAA
TACCTGACGC CGTTCGGCTT GGCGATGTAT GCCAGCCCGC TGAAGTGGGT GTTCATTTTT
GCGCCGCTGG CGATGGTCTT CGCCATCTCG TTCGGCATCA ACCGGCTGAA GCCTGCAACC
GCGCAAATGC TGTTCTGGGC TTTCTCGGCG CTGATGGGCG TGTCGCTGTC GTCGATCTTC
CTGGTGTACA CCCACACCTC GATCGTGCGG GTGTTCTTCA TCACGGCGGC CTCGTTCGGC
GCGCTGAGCC TCTACGGCTA CACCACCAAG CGTGACATGA CCGGCATGGG CTCGTTCCTG
ATCATGGGCC TGTTCGGCGT CATCATCGCG AGCGTCGTCA ACATCTTCGT GGCGAGCTCG
ATGCTGCAGT TCGTGGTGTC GGTCGTCGGC GTGCTGGTGT TCGCCGGCCT CACTGCCTAC
GACACCCAGC GGCTGAAGAA CGACTACATC TACGGCTACG CCTCGCAGGG CGGCGAGATC
GCGGAGCGCG CGGCGATTAC CGGTGCGCTA TCGCTCTACC TGAACTTCAT CAACCTGTTC
ACGCTGCTCC TGCAGTTGCT CGGACAGCGC GAGTAG
 
Protein sequence
MSDLDRNYTS PFGRAAGRVD RAAVDAGLRS YMLKIYNYMS IGLAITGLAA LGVYMFAVTG 
DATLAAKSAT GASLALKGGQ YLTPFGLAMY ASPLKWVFIF APLAMVFAIS FGINRLKPAT
AQMLFWAFSA LMGVSLSSIF LVYTHTSIVR VFFITAASFG ALSLYGYTTK RDMTGMGSFL
IMGLFGVIIA SVVNIFVASS MLQFVVSVVG VLVFAGLTAY DTQRLKNDYI YGYASQGGEI
AERAAITGAL SLYLNFINLF TLLLQLLGQR E