Gene Nham_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0525 
Symbol 
ID4029974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp580054 
End bp581409 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content63% 
IMG OID637969055 
Productcarboxyl-terminal protease 
Protein accessionYP_575875 
Protein GI92116146 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.29494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGCA AGGTTTCCCT TATTCTTCTC AGCGCTGCCG CGGGTGCGGC GCTGACGCTG 
TTCGTGACCC AGCCGCGGTC GGTGCTGATG GGATCGAGCG CGCGAGCCGC GACCTCGGAT
ACCTATCGCC AGCTCAACCT GTTCGGCGAT GTGTTCGAGC GGGTCCGTAG CGACTATGTC
GAGAAGCCCG ACGACAGCAA GCTGATCGAA TCGGCCATCA GCGGAATGCT GTCGGGTCTC
GATCCGCATT CGAGCTACAT GGACGCCAAG AGCTTCCGCG ACATGCAGGT GCAGACGCGC
GGCGAGTTTG GCGGCCTTGG CATCGAGGTC ACGATGGAGG ACGGCCTGGT CAAGGTGGTC
TCGCCGATCG ACGACACGCC GGCATCCAAG GCGGGAATCC TGGCGAACGA CATCATCACC
AATCTTGACG ATGAGGCGGT GCAGGGGCTC ACGCTCAACC AGGCCGTCGA CAAGATGCGC
GGCCCGATCG GCACCAAGAT CAAGCTGAAG ATCGTCCGCA AAGGCCAGGA CAATCCGATC
GACGTGACGC TGGTGCGCGA CAACATCCGC GTCCGCTCGG TGCGCTCGCA CGTCGAGACC
GACGACATCG CCTATATCCG CATCACCACC TTCAACGAGC AGACCACCGA AGGCCTCAAG
AAGTCGATTT CCGACCTGCA AGGCCAGATC GGCGACAAGC TCAAGGGTTA CATCATCGAT
CTGCGCAACA ACCCCGGCGG ATTGCTCGAA GAAGCGGTGA CCGTTTCCGA CAGCTTCCTC
GACCGCGGTG AGATTGTGTC GACGCGCGGC CGCAACGCCG AGGAAACCCA GCGTCGCAGC
GCGCATCCCG GCGACCTCAC CAAGGGCAAG CCGGTGATCG TTCTGATCAA CGGCGGGTCG
GCATCGGCTT CCGAAATCGT CGCCGGTGCG TTGCAGGACC ACAAGCGAGC GACACTGATC
GGGACCCGCT CATTCGGCAA GGGCTCCGTG CAGACCATCA TTCCGCTCGG TTCGGGCAAC
GGCGCGCTCC GCCTGACGAC GGCGCGCTAT TACACGCCGT CGGGCCGTTC GATTCAGGCC
AAAGGCATCG TTCCGGATAT CGAGGTGCTT CAGGATGTGC CCGATGAACT GAAGTCGCGG
ACCGACACCA AGGGAGAGGC TTCGCTGCGC GGCCATCTGC GCAACGGCAC CGACGAGAAG
ACCGGCTCGC AATCCTACGT CCCGCCGGAC GCCAAGAACG ACAAGGCGCT CAAGATGGCC
GACGACCTTC TGCACGGCAT CAAGGTCAAC GCCTCGTCGC CGGCCCCCGG CGACAAGGCG
GCGATCGAGA AGCCCGCGAA AAAGGCAACG AACTGA
 
Protein sequence
MMRKVSLILL SAAAGAALTL FVTQPRSVLM GSSARAATSD TYRQLNLFGD VFERVRSDYV 
EKPDDSKLIE SAISGMLSGL DPHSSYMDAK SFRDMQVQTR GEFGGLGIEV TMEDGLVKVV
SPIDDTPASK AGILANDIIT NLDDEAVQGL TLNQAVDKMR GPIGTKIKLK IVRKGQDNPI
DVTLVRDNIR VRSVRSHVET DDIAYIRITT FNEQTTEGLK KSISDLQGQI GDKLKGYIID
LRNNPGGLLE EAVTVSDSFL DRGEIVSTRG RNAEETQRRS AHPGDLTKGK PVIVLINGGS
ASASEIVAGA LQDHKRATLI GTRSFGKGSV QTIIPLGSGN GALRLTTARY YTPSGRSIQA
KGIVPDIEVL QDVPDELKSR TDTKGEASLR GHLRNGTDEK TGSQSYVPPD AKNDKALKMA
DDLLHGIKVN ASSPAPGDKA AIEKPAKKAT N