| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0471 |
|---|
| Symbol | |
|---|
| ID | 4030051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 520309 |
|---|
| End bp | 522576 |
|---|
| Gene Length | 2268 bp |
|---|
| Protein Length | 755 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637968999 |
|---|
| Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
|---|
| Protein accession | YP_575821 |
|---|
| Protein GI | 92116092 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAGCG CGTCGAGCGG CCCCCGCGTC TTGTTGAGAC GGCTCCGCGA AGTCATGGCG
GAGCAGGTCA GCGCACAGGA GCGTCTCGAC AAGATCGTGG TGCTGATCGC CGCCAACATG
GTGGCGGAGG TATGCTCGAC CTACGTGCTG CGCGTCGACA ACACTTTGGA ACTCTACGCC
ACCGAAGGCC TCAATCGCGA TGCCGTCCAT CGCACGGTGC TGACCGCGCA CGAGGGCCTC
GTCGGCCTGG TCGCAAGCGA AGCGACGCCA CTTAATCTGT CGGACGCGCA GAGCCATCCG
GCGTTCTCGT TCCGCCCGGA AACCGGCGAA GAAATCTACA ATTCGTTCCT CGGCGTGCCG
ATCCTGCGCG CGGGCAACAC GCTCGGCGTG CTGGTGGTGC AGAACCGCGC CAGGCGCACC
TACGTCGAGG AAGAAGTCGA AGCGCTCCAG ACCACGGCGA TGGTGGTCGC CGAGATGATC
GCCTCGGGCG AACTGGCCGC CCTCGCCCAG CCCGGCCTCG AGCCCGCCGC GCGCCACTCG
ATCCGCCAGA CCGGCGCGAT CCTGTCCGAC GGCATCGCGC TCGGCCATGT GGTGCTACAC
GAACCGCGCG TCGTCATCAC CAACTACATC GCCGAGGACC TGCCGAAGGA AATCAGGCGG
CTGGAAGCGG CGCTCGCCAA GCTGCGCGCC GACCTCGACC GCATGCTGGA GCGCGGCGAT
GTTGTAGACG GCGGCGAGCA TCGCGAGGTG CTCGAGGCGT ACCGGATGTT CGCCAACGAT
CACGGCTGGT CGCACAGGCT GCAGGAGGCG GTCGCAACCG GCCTCACCGC CGAAGCCGCC
GTCGAGCGTG TGCAATCGGA CACCCGCGCG CGGATGCTGC GCTCGACCGA CCCTTATCTG
CGCGACCGCC TACATGACCT CGAGGATCTC GGCCACCGCC TGATGCGGCA ACTGGTCGGA
CAGGACCACG CGCCTTCCCG CGAGCAACTC CCGGAGAATG CGATCCTGAT CGCGCGCGCC
ATGGGGCCGG CGGCGCTGCT GGACTACGAC CGCAAGCGGC TGCGCGGCCT GGTGCTGGAG
GAGGGCACCG CGAATTCGCA CGTCTCCATC GTCGCGCGCG CGCTGGGCAT CCCCGCCGTC
GGCGAGGTGC CGAACGCGCC CGGAATCGCC GACCCCGGCG ACGCCATCAT CGTCGACGGC
ACCTCGGGCG CGATCTACGT GCGGCCGTCG GCGGAAATCG AATCGGCTTA CGCCGAGCGC
GTGCGCTTTC GCGCTAGGCG GCAGGCGCAG TACATCGCGC TGCGCGACAA GCCCTGCGTC
ACCAAAGACG GCCAGCCGGT CGATCTCATG ATCAATGCCG GCCTCTTGAT CGACCTGCCG
CATCTCGAGG ACACCAATTG CTCGGGCATC GGCCTGTTTC GGACCGAGTT GCAATTCATG
GTCGGACAGA ACCTGCCGCG CACGAGCGAG CAGCTTGCGC TGTACCGCGC GGTGCTGGAC
GCCGCCGGTG ACAAGCCGGT GACTTTCCGC ACCCTCGACA TCGGCGGCGA CAAGGCGGTG
CCCTACATGG AAACCGTGGC GGAGGAAAAT CCGGCGCTGG GCTGGCGCGC GATCCGGCTC
GGGCTCGACC GTCCCGGTCT GCTGCGCGGG CAAGTCCGCG CGCTGCTGCG CGCCGGCGGC
GGACGCGCGC TGCGCATCAT GTTCCCGATG ATCTCGGAGG TCGCCGAATT CGATCAGGCC
AAGGCCATCA TCGAGCGCGA ACTCACATAT CTGCGCCAGC ACGGCCACGC GCTGCCGGAA
CGCGTGGACG TCGGCACGAT GGTCGAGGTG CCGGCGCTGT TGTACCAGCT CGACGAATTG
CTCAGGAAGG TCGATTTCGT CTCGGTCGGG TCGAACGACC TGTTTCAGTT CATGTTCGCG
GTCGATCGCG GCAACAGCAA GGTGTCGAAC CGCTTCGATA CGCTATCGGC GCCGATCCTG
CGGGCGCTGC GCGACATCGT GACCAAGGCC AAGGCAGCGG GAAAAAGCGC CTCGCTGTGC
GGGGAAATGG CGTCGCAGCC GCTGGGCGCG CTGGTGCTGA TCGCGCTCGG CTACCGCTCG
CTGTCGCTGT CGGCCACCGC GCATGGTCCC GTCAAGGCCA TGATTCTCGA TCTCGACGCG
AAGAAGGCGG AAGCGACGAT CATGCCGCTG CTCGACGCGC CCTCCGGCAG CATTTCGATC
CGCGACAAGC TCAGGAACTT CGCCGATGCC GAGGGACTGA CGTTGTAG
|
|---|
| Protein sequence | MRSASSGPRV LLRRLREVMA EQVSAQERLD KIVVLIAANM VAEVCSTYVL RVDNTLELYA
TEGLNRDAVH RTVLTAHEGL VGLVASEATP LNLSDAQSHP AFSFRPETGE EIYNSFLGVP
ILRAGNTLGV LVVQNRARRT YVEEEVEALQ TTAMVVAEMI ASGELAALAQ PGLEPAARHS
IRQTGAILSD GIALGHVVLH EPRVVITNYI AEDLPKEIRR LEAALAKLRA DLDRMLERGD
VVDGGEHREV LEAYRMFAND HGWSHRLQEA VATGLTAEAA VERVQSDTRA RMLRSTDPYL
RDRLHDLEDL GHRLMRQLVG QDHAPSREQL PENAILIARA MGPAALLDYD RKRLRGLVLE
EGTANSHVSI VARALGIPAV GEVPNAPGIA DPGDAIIVDG TSGAIYVRPS AEIESAYAER
VRFRARRQAQ YIALRDKPCV TKDGQPVDLM INAGLLIDLP HLEDTNCSGI GLFRTELQFM
VGQNLPRTSE QLALYRAVLD AAGDKPVTFR TLDIGGDKAV PYMETVAEEN PALGWRAIRL
GLDRPGLLRG QVRALLRAGG GRALRIMFPM ISEVAEFDQA KAIIERELTY LRQHGHALPE
RVDVGTMVEV PALLYQLDEL LRKVDFVSVG SNDLFQFMFA VDRGNSKVSN RFDTLSAPIL
RALRDIVTKA KAAGKSASLC GEMASQPLGA LVLIALGYRS LSLSATAHGP VKAMILDLDA
KKAEATIMPL LDAPSGSISI RDKLRNFADA EGLTL
|
|---|
| |