Gene Nham_0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0345 
Symbol 
ID4030442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp375350 
End bp377809 
Gene Length2460 bp 
Protein Length819 aa 
Translation table11 
GC content65% 
IMG OID637968879 
Producthypothetical protein 
Protein accessionYP_575701 
Protein GI92115972 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.427244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACAGG GGTTCTGGAT CCTCGCCGTT CTGCTCAGCC ATTGGCGCCG GCATCCGCTG 
CAATTGACAA CCCTCATGAT CGGCTTGATC TCCGCGACCG CATTGTGGAG CGGCGTGCAG
GCGCTGAACC AGCAGGCTCG CATCAGCTAC GATCGGGCCG CGGCGGTCTT TGGCGGCGCC
AGAATCGCGA TGCTGGTCGG GCAGCAGGAC ACGTTTCCCC AGCAGCTCTT CGTCGATCTT
CGGCGGGCAG GCTGGCCGGT CTCACCCGTG CTCGAAGGCC GCGTTCGTAT TCACGGGAAG
ACATTCCGCC TATTGGGAAT CGAGCCGGTG ACCTTTCCAG CGGAGGCAGG ATCGATTCCG
GCGATCGGGA CGTCGGATCT GACATCGTTC ATTGCGCCGC CGGGCGAGAC CCTGGTCGCG
CCGGAGACAT TGACCGAGCT GACCGGAACG GAAGGCACGG CCCTTCGAAC AGACGACGGC
GCGTTGCTGC CGCCCCTCAA GGTTCAAGCG CAGCTCGCAC CGGGGGTTGT GATCGTCGAT
ATCGGAGTGG CGCAAAGCCT TCTTCACCTG CCGGACCAGC TCTCACGTCT GTCGATCGGA
AAAACGCGCA GCACGCACGC GCCGCTCGAG GCTGTCACTG GTGACAAGCT CAGATATGTC
GCCCCGGACG CCGAAACCGA TCTTGAGCGT CTGACCGACA GCTTTCATCT CAATCTGTCG
GCCTTCGGGC TGCTATCGTT TCTGGTCGGA CTCTTTATCG TCTATTCGGC GATCGGCCTC
GCCTTCGAGC AGCGCATGCC GATGCTGCGC ACATTGCGCG CCTGCGGCGC ATCGTCCCGG
ATGTTGAACG GCGTGTTGCT GATCGAGTTG CTGGTGCTGG CCCTCGCAGC CGGGCTGATC
GGGTTGGCCT GCGGATATCT GATCGCCGCG GCGTTGCTGC CCAATGTCGC CGCAAGCCTG
CAGGGGCTGT ATGGCGCCCG GCTTCCCGGC CAATTGACGC TGAGACCGGA ATGGTGGGCC
GCGGGACTTG CAATGAGCGC CCTGGGAACG CTGGTGGCGG CAACGACGAG TCTGCTGAGG
GTGGTTCGCC TTCCGGTTCT CGCAATGGCG CAACCTTATG CGTGGCAGCA GGCCCAACGG
CGATGGCTGC GCTGGCAAGG CCTATGCGCC GTTGCGATGC TTGTCACGGC GGTCGCCGTG
CTGACGATCG GCGATTCGCT GGTCTCGGGA TTCGCCGTGC TGGCGGCACT CCTGCTGGGC
GCAGCGCTGA CCCTGCCTGT TCTGCTCGGA TTCGTACTTC ACGCCGGCGA ACGAAGCACG
CGCCGGCCGC TGGTGATGTG GTTCTGGGCC GACAGCCGCC AGCAGCTTCC CGGATTGTCG
CTGGCACTGA TGGCGTTGCT GCTCGCGCTC GCGGTCAATG TCGGCGTCGG AACCATGGTC
GAGAGCTTCA GCAAGACGTT CGCCACATGG CTGGACGGCC GGCTCGCGGC GGATGTGTAT
GTCAACGCGC GCGACGACGC GCAGGCGCGC GACATCGAAA CAAGGCTGCG CGCGCGGCCC
GAGGTCACCG CGATCCTGCC GAGCGGCCGC GCCGAGACAG AAATCGGCGG CTGGCCCGTG
GAGGTTCTTG GCCTCGCCGA TCACGCCACC TATCGCGACC GCTGGCCGTT GCTCCGATCG
CAAGCGAATG CGTGGGACGA GGTCAAATCA GGTCAGGCTG CGCTGATCAG CGAACAACTG
GCGCGCAAGC TGAAACTGCG GCTCGGCGAT CGGCTGACGA TCAGCACCCC CGGCGGCAAC
TGGCCCGTAG ACATCGCGGC GATCTACGCT GATTACGGCA ATCCCAAAGG GCAGATCGCC
GTCAATATCG TCGCCTTCAC AAGCCGGTTT CCAGATCTGC CGCGAACCCG GTTCGGTCTG
CGCGTGACCC CCGGCAAGAT CGCGCCGCTG ATCGATGACA TGCGCAAGAC GTTTCATCTC
GACGAGAGCC GCCTCTCGGA TCAATCCACG CTGAAAGCGG AATCGACGCG GATTTTCAAC
CGCACCTTCG CCGTGACGGC TGCGCTGAAT ACGTTTACGC TCGGCGTCGC CGGCGTTGCG
CTGCTCACCA GCCTGCTGAC CCTGAGCAAC TCCCGCCTTC CGCAACTGGC GCCGTTGTGG
GCGCTCGGCC TGACCCGGCG GCAATTGGCC GGCATCGAGC TTCTCAAGAC CCTGTCCGTC
GCGTTCGTCA CCGCGATGCT GGCGCTGCCG CTGGGCTTGC TGGTGGCGTG GTGTCTGATC
GCGGTGGTCA ACGTCAGGGC ATTCGGCTGG CGCCTCCCGT TCCATGTTTT TCCGCTGCAT
CTGATTGAGC TTCTCGGCGT CGCCATGCTG GCGTCGCTGC TGGCGATGCT GGTGCCGGTC
TTGAAACTGA TGCGCATGCC TCCGGCGACG CTGATCAAGG TCTTCGCCGA TGAGCGTTAG
 
Protein sequence
MKQGFWILAV LLSHWRRHPL QLTTLMIGLI SATALWSGVQ ALNQQARISY DRAAAVFGGA 
RIAMLVGQQD TFPQQLFVDL RRAGWPVSPV LEGRVRIHGK TFRLLGIEPV TFPAEAGSIP
AIGTSDLTSF IAPPGETLVA PETLTELTGT EGTALRTDDG ALLPPLKVQA QLAPGVVIVD
IGVAQSLLHL PDQLSRLSIG KTRSTHAPLE AVTGDKLRYV APDAETDLER LTDSFHLNLS
AFGLLSFLVG LFIVYSAIGL AFEQRMPMLR TLRACGASSR MLNGVLLIEL LVLALAAGLI
GLACGYLIAA ALLPNVAASL QGLYGARLPG QLTLRPEWWA AGLAMSALGT LVAATTSLLR
VVRLPVLAMA QPYAWQQAQR RWLRWQGLCA VAMLVTAVAV LTIGDSLVSG FAVLAALLLG
AALTLPVLLG FVLHAGERST RRPLVMWFWA DSRQQLPGLS LALMALLLAL AVNVGVGTMV
ESFSKTFATW LDGRLAADVY VNARDDAQAR DIETRLRARP EVTAILPSGR AETEIGGWPV
EVLGLADHAT YRDRWPLLRS QANAWDEVKS GQAALISEQL ARKLKLRLGD RLTISTPGGN
WPVDIAAIYA DYGNPKGQIA VNIVAFTSRF PDLPRTRFGL RVTPGKIAPL IDDMRKTFHL
DESRLSDQST LKAESTRIFN RTFAVTAALN TFTLGVAGVA LLTSLLTLSN SRLPQLAPLW
ALGLTRRQLA GIELLKTLSV AFVTAMLALP LGLLVAWCLI AVVNVRAFGW RLPFHVFPLH
LIELLGVAML ASLLAMLVPV LKLMRMPPAT LIKVFADER