Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0278 |
Symbol | |
ID | 4031158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 308769 |
End bp | 309506 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637968813 |
Product | OmpA-like transmembrane region |
Protein accession | YP_575637 |
Protein GI | 92115908 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.670906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGGGC CGACGAACGG TTGCTCGGAC ATCGAATTCC TGGAGAACGT AATGAAAAAA ATCCTACTCG CTTCTGTAGC AATTGTCGGC ATGGCCGCGA TCGTGCCGGC ACAGGCCGCG GATCTCGCCG CTCGCCCCTA CACCAAGGCT CCGGTCTATG AGGCCGCGCC GATCTACAAC TGGACCGGCT TCTACCTCGG TGGTCACGTC GGCGGCGCCT TCGGCGGCGA TCACAACCTC GCCGCTCCCG GTTTCACCCG CAATGGCAAC GACGGCGTGT TCATGGGCGG CGGCCAGATC GGCTACGACT ATCAGTTTTC TCCGAACTGG GTGTTCGGTA TTGGGGCTAA CTACAGCTTC CTCGACACCA ACGACCATCC CTTCGTGAAC CGCGGACTCG GTTCGGTCAC CGGCCGTCTC GGCTACACTT GGGGTCCGGC GCTGCTGTAC GCCAAGGGCG GCTACGCCTG GGCCGATACT CGCAACACCA ACGGCTTCGG CGGCGACACC TTTTCCAACA ACCGCATCGG TCGGGACGGC TTCACCGTCG GCGGCGGTCT GGAATATATG TTCACCCAGA ACTGGTCGGG CCTGATCGAG TATCAGTACT ATGACTTCGG CACCACGCGC ACTACCTTCC GTAATCAGGA CGTTCGCTTC CGCAACGACG AGCACACCAT CAAGGTCGGC CTGAACTATC GCTTCAACTG GGGCGCCCCG GTCGGCCCGA GGTACTGA
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Protein sequence | MTGPTNGCSD IEFLENVMKK ILLASVAIVG MAAIVPAQAA DLAARPYTKA PVYEAAPIYN WTGFYLGGHV GGAFGGDHNL AAPGFTRNGN DGVFMGGGQI GYDYQFSPNW VFGIGANYSF LDTNDHPFVN RGLGSVTGRL GYTWGPALLY AKGGYAWADT RNTNGFGGDT FSNNRIGRDG FTVGGGLEYM FTQNWSGLIE YQYYDFGTTR TTFRNQDVRF RNDEHTIKVG LNYRFNWGAP VGPRY
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