| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0229 |
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| Symbol | |
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| ID | 4030000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 253067 |
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| End bp | 254401 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637968765 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_575589 |
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| Protein GI | 92115860 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.141477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTATCG GTGAATTTGG ACGCCCTCCG GATATGCCGG CGGAAGTCAG TCCGGCGATG
ACGGCGCCGA TGTACTGGAT GTACGAGATG GCGCAGGCCT CGCTCAACCC GGCTCGCGCC
GTTACCGATG CGACCAGGAT GCTGTTCCAG AATCCGCTCA ATCCGTGGTC GCATACCGAG
TTCGGCAAAT CCGTCGCCGC GGGCTGCGAA CTGTTCGAGC GCACCACCCG CCGTTACGGA
AAACCGGAAT GGGGCCTGCA CGAGACCGAG GTCAACGGCG TGCGCACGCC GATGGAGATC
CGCTCGGTCT GGGAAAAGCC GTTCTGCCGC CTGCTCTACT TCGACCGCAT GCATGTGCGT
CCGCTGCGGA AGCCGCAGCC GCGCGTGCTG CTGGTGGCGC CGATGTCGGG CCACTACGCG
ACCTTGCTGC GCGGAACCGT CGAGGCGTTC ATGCCGACGC ATGACGTCTA TATCACCGAC
TGGACCGACG CCCGGATGGT GCCGGTGTCG GAAGGGCGCT TCGATCTCGA CGACTACGTC
GATTACCTGA TCGAGATGCT GCATGTGCTG GGCGGAAACG TCCATATCAT CGCGGTCTGC
CAACCGTCGG TGCCGGTGCT GGCCGCGGTG TCGGTGATGG AGGCCGAGGG CGATCCCTGT
GTCCCGCTGT CCATGACGCT GATGGGCGGA CCGATCGATA CGCGCAAGAA CCCGACCGCC
GTCAACAACC TCGCCGCCGC GAAGGGCACC GACTGGTTCC GCAACAATGT CATCACCAAG
GTGCCGTTCC CGCATCCCGG CGTAATGCGC GATGTCTATC CGGGCTTCCT GCAGCTCAAC
GGCTTCATCA CCATGAACCT CGATCGCCAC ATGGAGGCGC ACAAGAGTCT GTTCAAGAAC
CTCGTCAAGG GCGACGGCGA CCTGGTCGAC AAGCACCGCG ATTTCTACGA CGAGTATCTC
GCCGTGATGG ACCTGACCGC TGAATACTAC CTGCAGACGG TGGATCTCGT GTTCGTCAAG
CACGCGCTGC CGAACGGCGA GATGACCCAT CGCGGCCGGC CTGTCGACCC TTCGAAGATC
ACGCGCGTCG CCCTGATGAC GGTGGAAGGC GAGAAAGACG ATATTTCCGG GCTCGGCCAG
ACCGAGGCGG CTCACGCGCT GTGCACATCG ATCCCCGAGC GTCGGCGGGC ACACTACATG
CAAAAAGGCG TCGGCCACTA CGGCGTGTTC AACGGTTCGC GGTTCAAGTC GGAGATTGTG
CCGCGCATCA ACGACTTCAT GCAGTCGAAC GCCAGGCACC CGGCACAATT ATCGCGCGCT
GCGGCCGCGG AATGA
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| Protein sequence | MPIGEFGRPP DMPAEVSPAM TAPMYWMYEM AQASLNPARA VTDATRMLFQ NPLNPWSHTE
FGKSVAAGCE LFERTTRRYG KPEWGLHETE VNGVRTPMEI RSVWEKPFCR LLYFDRMHVR
PLRKPQPRVL LVAPMSGHYA TLLRGTVEAF MPTHDVYITD WTDARMVPVS EGRFDLDDYV
DYLIEMLHVL GGNVHIIAVC QPSVPVLAAV SVMEAEGDPC VPLSMTLMGG PIDTRKNPTA
VNNLAAAKGT DWFRNNVITK VPFPHPGVMR DVYPGFLQLN GFITMNLDRH MEAHKSLFKN
LVKGDGDLVD KHRDFYDEYL AVMDLTAEYY LQTVDLVFVK HALPNGEMTH RGRPVDPSKI
TRVALMTVEG EKDDISGLGQ TEAAHALCTS IPERRRAHYM QKGVGHYGVF NGSRFKSEIV
PRINDFMQSN ARHPAQLSRA AAAE
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