Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0228 |
Symbol | |
ID | 4029999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 252028 |
End bp | 252864 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637968764 |
Product | hypothetical protein |
Protein accession | YP_575588 |
Protein GI | 92115859 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.31038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTTGTT TTTGCGCCGA GCGATTCGAC TGGCGTCGGA TATGGCAGAA TCCGGGCGAC ACTCCCGCCT CCGGATTTAC TGACATGGCC CGCGCACTGC TTTATCGACG TCCCGCCGAA CCGTCCCGGC TTCTGGTCAA GCACGGTTCG CAAATCTATT CGGTGCGCTT GCGCCGGCAT CGCCGCGCCC GCCGCTACAC CTTGCGGATC CATCCGAGCG ACCGCGAAGC GATCCTGACC ATGCCGCCGC GGGGAACGCT CGTGGAGGCC AAGGACTTTG CGCAACGTCA CGGCGGCTGG ATCGCGGCGC GCCTCGGGCG ACTGCCGAAG GCGGCGCCGT TCCACCACGG CGCGGTCATT CCGCTGCGCG GCGTCGCCCA CCGGATCGTG CATCGCACAG GCGAGCGCGG CACGGTGTGG ACCGAAACAC GCGACAGCGG CGAGCGCATT CTTTGTGTCG CCGGCGGGCT CGACTATCTC GACCGGCGTG TGCACGATTT TCTGAAGCGG GAAGCACGTC ACGACCTGCA AAAGGCCACG CAACGCTACG CCGATACGCT GGGCGTCAAG GTCAAGCGTC TTTCGATCCG CGACCAGTCG AGCCGCTGGG GATCGTGCAC ATCGTCGGGA TCGCTGTCGT TCTCATGGCG GCTCATCCTG GCGCCGCCGT TCGTGCTGGA CTATCTCGCC GCCCACGAGG TCGCCCACCT CGTTGAAATG AATCATTCGC CGCGATTCTG GAAGGTGGTG GCGCGAATCT GCAATCATGT CGAGCGCGCC AAGAAGTGGC TCGACGCCGA AGGCAACGAT CTCCACCGCT ACGGCATTCA GGATTGA
|
Protein sequence | MICFCAERFD WRRIWQNPGD TPASGFTDMA RALLYRRPAE PSRLLVKHGS QIYSVRLRRH RRARRYTLRI HPSDREAILT MPPRGTLVEA KDFAQRHGGW IAARLGRLPK AAPFHHGAVI PLRGVAHRIV HRTGERGTVW TETRDSGERI LCVAGGLDYL DRRVHDFLKR EARHDLQKAT QRYADTLGVK VKRLSIRDQS SRWGSCTSSG SLSFSWRLIL APPFVLDYLA AHEVAHLVEM NHSPRFWKVV ARICNHVERA KKWLDAEGND LHRYGIQD
|
| |