Gene Nham_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0228 
Symbol 
ID4029999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp252028 
End bp252864 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID637968764 
Producthypothetical protein 
Protein accessionYP_575588 
Protein GI92115859 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.31038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTGTT TTTGCGCCGA GCGATTCGAC TGGCGTCGGA TATGGCAGAA TCCGGGCGAC 
ACTCCCGCCT CCGGATTTAC TGACATGGCC CGCGCACTGC TTTATCGACG TCCCGCCGAA
CCGTCCCGGC TTCTGGTCAA GCACGGTTCG CAAATCTATT CGGTGCGCTT GCGCCGGCAT
CGCCGCGCCC GCCGCTACAC CTTGCGGATC CATCCGAGCG ACCGCGAAGC GATCCTGACC
ATGCCGCCGC GGGGAACGCT CGTGGAGGCC AAGGACTTTG CGCAACGTCA CGGCGGCTGG
ATCGCGGCGC GCCTCGGGCG ACTGCCGAAG GCGGCGCCGT TCCACCACGG CGCGGTCATT
CCGCTGCGCG GCGTCGCCCA CCGGATCGTG CATCGCACAG GCGAGCGCGG CACGGTGTGG
ACCGAAACAC GCGACAGCGG CGAGCGCATT CTTTGTGTCG CCGGCGGGCT CGACTATCTC
GACCGGCGTG TGCACGATTT TCTGAAGCGG GAAGCACGTC ACGACCTGCA AAAGGCCACG
CAACGCTACG CCGATACGCT GGGCGTCAAG GTCAAGCGTC TTTCGATCCG CGACCAGTCG
AGCCGCTGGG GATCGTGCAC ATCGTCGGGA TCGCTGTCGT TCTCATGGCG GCTCATCCTG
GCGCCGCCGT TCGTGCTGGA CTATCTCGCC GCCCACGAGG TCGCCCACCT CGTTGAAATG
AATCATTCGC CGCGATTCTG GAAGGTGGTG GCGCGAATCT GCAATCATGT CGAGCGCGCC
AAGAAGTGGC TCGACGCCGA AGGCAACGAT CTCCACCGCT ACGGCATTCA GGATTGA
 
Protein sequence
MICFCAERFD WRRIWQNPGD TPASGFTDMA RALLYRRPAE PSRLLVKHGS QIYSVRLRRH 
RRARRYTLRI HPSDREAILT MPPRGTLVEA KDFAQRHGGW IAARLGRLPK AAPFHHGAVI
PLRGVAHRIV HRTGERGTVW TETRDSGERI LCVAGGLDYL DRRVHDFLKR EARHDLQKAT
QRYADTLGVK VKRLSIRDQS SRWGSCTSSG SLSFSWRLIL APPFVLDYLA AHEVAHLVEM
NHSPRFWKVV ARICNHVERA KKWLDAEGND LHRYGIQD