| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0202 |
|---|
| Symbol | |
|---|
| ID | 4030662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 225903 |
|---|
| End bp | 226823 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637968737 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_575562 |
|---|
| Protein GI | 92115833 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.725948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCAC AGATTACTGT TTCCGCCAAC GAAAGATTGA TCCGCCGCCT TGCGACCATG
CTGGGTTGTA TGCTGGTCGC CGGCTGGATG CTGGTTTTGG GAGCAGCGGT CGACGATGCG
CGCGCGCAAG CCGCAGCGAA GACCGCCACC GTCGCGCCGC AGGCGGTGCC GGGCTTCTGG
GATCCGCGCC GCCGTCCGGA TCGCCCCGAT CTGTCACGCA TCACCGTGAT CCGCTTTCTG
ACCGAGACCG ACTATCCGCC CTTCAACTTC ACCGGTCCCG ACGGCAATCC GGCCGGCTTC
AATGTCGATC TGGCGCGCGC CCTGTGCGAG GAAATCAAGA TCACCTGCAC GATTCAGATG
CGGCGCTTCG AGACGCTGGT GGACGCGCTC ACCAGCAACC GCGGCGACGC CATCATCGCC
TCGCTCGCGG TAACGCCGGA GCTGCGCAAG CGGGTGGACT TCACCGACCC GTACTATCGA
ACGCCGGCGC GATTCGTGTC GCGGCGCGAC GCCGTGATGG CCGAGGTGCG CCCGGAATAT
CTCGAGGGCA AGAAGGTCGG CGTGATCGCA GGGTCGGCGC ACGAGGCCTA TCTCAAGGTC
TTCTTCACCG ATGCCGAACT CCACACCTAT CCGAACGACG AGGCGCTGCG GCAGGCGCTG
CGGCGGGGCG AAGTCGACTT CATTTTCGGC GACGCCATTT CACTGGCGTT CTGGATCAAC
GGCACCGATT CGGAAGGCTG CTGCGCCTTC AGCGGCGGCC CCTTTGTCGA GAGCCGCTAT
TTTGGCGAAG GCGTCGGCAT CGCGGTGAAA AAGGGCAATG ACGTGCTGCG TCAGGCGCTG
AACTGGGCGC TGTTCCGGGT CTGGGAAAAA GGCCGCTATA CCGACCTGTG GTTGCGGTAT
TTTTCCGTCA GTCCGTTTTA G
|
|---|
| Protein sequence | MQPQITVSAN ERLIRRLATM LGCMLVAGWM LVLGAAVDDA RAQAAAKTAT VAPQAVPGFW
DPRRRPDRPD LSRITVIRFL TETDYPPFNF TGPDGNPAGF NVDLARALCE EIKITCTIQM
RRFETLVDAL TSNRGDAIIA SLAVTPELRK RVDFTDPYYR TPARFVSRRD AVMAEVRPEY
LEGKKVGVIA GSAHEAYLKV FFTDAELHTY PNDEALRQAL RRGEVDFIFG DAISLAFWIN
GTDSEGCCAF SGGPFVESRY FGEGVGIAVK KGNDVLRQAL NWALFRVWEK GRYTDLWLRY
FSVSPF
|
|---|
| |