Gene Nham_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0184 
Symbol 
ID4030778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp204018 
End bp204824 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID637968720 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_575545 
Protein GI92115816 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCCG ATGCGATCAG AGCCGTCATT CTCGGGATCG TCGAAGGCGT CACCGAATTC 
CTGCCGGTGT CCTCGACCGG CCATCTGCTG CTGGCGGAGC GCTTCTTCGA TCTCGGTTCG
GGGAATTTCT GGAACACGTT CACGGTGCTG ATCCAGCTCG GCGCGATTCT CGCGATCGTC
GTCATCTATT TTGAGAAACT GTGGCGCATC GCGCTCGGGA TGTTCTCCAA TGACGCGGAC
CGGCGCTTCG TCATCGGCGT GCTCGCGGCC TTCCTTCCGG CCGTGGTCGT CGGCCTGATC
GCCGGCAAGT ACATCAAGGA ACTGCTGTTC AATCCGTGGG TGGTGTGCTT CTCGCTGATC
GTCGGCGGCG CGGTGCTGAT GTGGGTCGAT CAGCTCGACC ACAAGCCGCA CGAACACGAC
GCCACCGCCT TTCCGCTGCC GATGTATATC TGGATCGGCA TCGCGCAGTG CCTTGCGATG
ATTCCCGGCG TGTCGCGCTC CGGCGCCACC ATCGTCTCGG CGATGCTGCT CGGCGCCGAC
AAGCGCGCGG CTGCGGAATT CTCCTTCTTC CTTGCGATCC CGACCATGAT CGGGGCCTTC
GCCTATGATT TCTACAAGAA CCGCGCCGAC ATGACGACCG ACCATCTCGG CATCGTCGCG
ATCGGCTTCG TGGTGTCGTT CGTCACGGCG ATCGTCGTGG TGAAGGCGTT CCTGAGTTAC
GTCACACGCA ACGGCTTTAC GTTCTTCGCC TGGTGGCGGG TGATCGTCGG CACGCTCGGC
CTGATCGCGC TGGCACTGGG GCGGTGA
 
Protein sequence
MFSDAIRAVI LGIVEGVTEF LPVSSTGHLL LAERFFDLGS GNFWNTFTVL IQLGAILAIV 
VIYFEKLWRI ALGMFSNDAD RRFVIGVLAA FLPAVVVGLI AGKYIKELLF NPWVVCFSLI
VGGAVLMWVD QLDHKPHEHD ATAFPLPMYI WIGIAQCLAM IPGVSRSGAT IVSAMLLGAD
KRAAAEFSFF LAIPTMIGAF AYDFYKNRAD MTTDHLGIVA IGFVVSFVTA IVVVKAFLSY
VTRNGFTFFA WWRVIVGTLG LIALALGR