| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0163 |
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| Symbol | rpsA |
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| ID | 4029319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 183215 |
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| End bp | 184915 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637968697 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_575524 |
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| Protein GI | 92115795 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.97893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCGA CTGATACCTA CAACCCGTCC CGCGACGATT TCGCCGCGAT GCTCGATGAG
TCCTTCGCCG GCGGCAGCCT GCAGGAAAGC TCCGTCATCA AGGGCAAGGT GGTTGCGATC
GAGAAGGACA TGGCCGTCAT CGACGTCGGC CTCAAGACCG AAGGCCGCGT GGCGCTGCGC
GAATTCGCCG GACCCGGCCG CGAAAACTCC CTGAAGGTCG GCGACGAGGT CGAGGTGTTT
CTCGATCGCA TCGAGAACGC GCTCGGCGAG GCCGTGCTGT CGCGCGACAA GGCGCGCCGC
GAGGAGAGCT GGGGCAAGCT CGAAAAGGCG TTCCAGAACA ACGAGAAGGT CCACGGCGTC
ATCTTCAATC AGGTCAAGGG CGGCTTCACC GTCGATCTCG ACGGCGCCGT AGCCTTCCTG
CCGCGCTCGC AGGTGGACAT CCGCCCGATC CGCGACGTCG GCCCGCTGAT GAACAACACC
CAGCCGTTCC AGATCCTCAA GATGGATCGC CGCCGCGGCA ACATCGTCGT CTCCCGCCGC
ACGGTTCTGG AAGAGACCCG CGCCGAGCAG CGCCAGGAAC TGGTGCAGAA CCTCGAAGAG
GGTCAGGTCA TCGACGGCGT CGTCAAGAAC ATCACCGACT ACGGCGCGTT CGTCGACCTC
GGCGGCATCG ACGGCCTGTT GCACGTCACC GACATCGCCT GGCGCCGCGT CAATCATCCG
ACCGAAGTGC TGGCCATCGG CCAGACGGTG AAGGTCAAGA TCATCAAGAT CAACCACGAG
ACCCACCGCA TCTCGCTCGG CATGAAGCAG CTCCTCGACG ATCCGTGGCA GGGCATCGAG
GCGAAGTATC CGCTCAACGC CCGCTACACC GGTCGCGTCA CCAACATCAC CGACTACGGC
GCGTTCGTCG AACTGGAGCC AGGCATCGAG GGCCTGATCC ACGTTTCCGA GATGTCGTGG
ACCAAGAAGA ACATGCACCC CGGCAAGATC GTCTCGACCT CGCAGGAAGT CGAGGTGCAG
GTGCTCGAGG TCGACGCCGT CAAGCGCCGG ATTTCGCTCG GCCTCAAGCA GACCATGCGC
AATCCCTGGG AAGCGTTCGT CGAAAAGCAC CCGGTCGGTT CGACCGTGGA GGGCGAGGTC
AAGAACAAGA CCGAGTTCGG CCTGTTCCTC GGCCTCGAGG GCGACGTCGA CGGCATGGTC
CATCTCTCCG ACCTCGACTG GAAACAGCCG GGCGAGCAGG TCATCGACAA CTTCAAGCGC
GGCGATATGG TCAAGGCCAT CGTGCTCGAC GTCGACGTCG AGAAGGAGCG CATCTCGCTC
GGCGTCAAGC AGCTCGAAGG CGACCCGTTC GCCGAGCCGG GCGACGTCAA GAAGGGCGCG
GTCGTGACCT GCGAAGTGCT TGAGATCAAG GACGGCGGCA TCGAGGTGCA GATCGCCGGC
ACCGAGTTCC AGACCTTCAT CAAGCGTTCG GAACTGGCGC GCGACCGCAA CGACCAGCGC
AGCGAGCGTT TCGCCGTCGG CGAGAAGGTC GATGCCCGCG TCATCCAGTT CGACAGGAAG
GCCCGCAAGG TGCAGGTCTC GATCAAGGCG CTTGAGGTCG CCGAAGAGAA GGAAGCCATT
GCGCAATATG GCTCCTCCGA TTCTGGCGCG ACGCTGGGCG ACATCCTCGG CACCGCGCTG
AAACAGCGCA CCGACAAGTA A
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| Protein sequence | MASTDTYNPS RDDFAAMLDE SFAGGSLQES SVIKGKVVAI EKDMAVIDVG LKTEGRVALR
EFAGPGRENS LKVGDEVEVF LDRIENALGE AVLSRDKARR EESWGKLEKA FQNNEKVHGV
IFNQVKGGFT VDLDGAVAFL PRSQVDIRPI RDVGPLMNNT QPFQILKMDR RRGNIVVSRR
TVLEETRAEQ RQELVQNLEE GQVIDGVVKN ITDYGAFVDL GGIDGLLHVT DIAWRRVNHP
TEVLAIGQTV KVKIIKINHE THRISLGMKQ LLDDPWQGIE AKYPLNARYT GRVTNITDYG
AFVELEPGIE GLIHVSEMSW TKKNMHPGKI VSTSQEVEVQ VLEVDAVKRR ISLGLKQTMR
NPWEAFVEKH PVGSTVEGEV KNKTEFGLFL GLEGDVDGMV HLSDLDWKQP GEQVIDNFKR
GDMVKAIVLD VDVEKERISL GVKQLEGDPF AEPGDVKKGA VVTCEVLEIK DGGIEVQIAG
TEFQTFIKRS ELARDRNDQR SERFAVGEKV DARVIQFDRK ARKVQVSIKA LEVAEEKEAI
AQYGSSDSGA TLGDILGTAL KQRTDK
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