Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0149 |
Symbol | |
ID | 4029458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 168230 |
End bp | 169390 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637968683 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_575510 |
Protein GI | 92115781 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCAGCG CTGATCCGAC CACTGCGTTC GGCGTCTACG TGCACTGGCC GTTTTGCCTG TCGAAATGCC CGTATTGCGA TTTCAACAGT CATGTGCGCC ACGCGCCGAT CGATGAAGAG CGCTTTGTTC GCGCCTTCAC ACGCGAAATC GAGACCACCG CCGCCCGCTC GCCCGGCCGC GAAGTGTCCT CGATTTTCCT CGGCGGCGGT ACGCCGTCAT TAATGCAGCC GCAGACCGTC GGCGCCATCC TCGAGGCGAT CGGAAAGAAT TGGCGCGTCG CCGATAACGC CGAGATCACG CTGGAGGCTA ATCCGACCAG CGTCGAGGCC ACCCGGTTCC GCGGCTATCG CGCTGCGGGC GTCAATCGCG TCTCGCTCGG CGTGCAGGCG CTCGACGACG CTTCGCTAAA GGCACTTGGA CGCCTGCACA CCGCGCGCGA GGCGCTGGAT GCGGTGGCGA TCGCGCGCTC GGTCTTTGAT CGTTATTCCT TCGATCTGAT CTACGCGCGC CCCGATCAGA CGCCGGCGAT GTGGAGCGAG GAATTGCAGC GCGCGATCTC CGAAGCCGCA GAGCATCTGT CGCTCTATCA ATTGACCATC GAACAAGGTA CGCCGTTTTT CGGCCTGCAC GCGGCCGGCA AACTCAAGAC ACCCGATGAG GCGATCTCGC GCGCTTTGTA TGACGTCACG CAGGAGATCT GCGCGCGTCA TGGCTTGCCC GCCTACGAGA TTTCGAATCA CGCGCGGCCC GGCGCGGAAT GCCGGCACAA CCTGGTTTAC TGGCGCGGCC AGGAATATGC AGGCATCGGC CCCGGGGCAC ACGGTCGCCT CGACATCGAC GGCGACAGGC ATGCCATCGC CACCGAAAAG CGGCCCGAGG CCTGGCTCAT GCGGGTCGAG GCTATTGGTA ACGGGATCGT CGCCGACGAT CTCCTGAATA GCGAAGAGCG TGCCGACGAG TTCCTGCTGA TGGGACTGCG CTTGCGCGAG GGCATTGATC CGCAGCGCTA TGCGGCACTG TCGGGCCGGC TCCTCGATCC GCGACGAATC GCAATCCTGC GCGAGGAAGG CGCGATCGCG ATCAGCCCCG ATGGCCGCTT GCGGGTCACG CAGGATGGCT TTCCCGTCCT TGACGCCGTG GTGGCTGATC TCGCCGCCTG A
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Protein sequence | MTSADPTTAF GVYVHWPFCL SKCPYCDFNS HVRHAPIDEE RFVRAFTREI ETTAARSPGR EVSSIFLGGG TPSLMQPQTV GAILEAIGKN WRVADNAEIT LEANPTSVEA TRFRGYRAAG VNRVSLGVQA LDDASLKALG RLHTAREALD AVAIARSVFD RYSFDLIYAR PDQTPAMWSE ELQRAISEAA EHLSLYQLTI EQGTPFFGLH AAGKLKTPDE AISRALYDVT QEICARHGLP AYEISNHARP GAECRHNLVY WRGQEYAGIG PGAHGRLDID GDRHAIATEK RPEAWLMRVE AIGNGIVADD LLNSEERADE FLLMGLRLRE GIDPQRYAAL SGRLLDPRRI AILREEGAIA ISPDGRLRVT QDGFPVLDAV VADLAA
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