Gene Nham_0107 details

Gene Information

• Locus tag: Nham_0107
• ID: 4029608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 124093
• End bp: 126141
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637968641
• Product: hypothetical protein
• Protein accession: YP_575468
• Protein GI: 92115739
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1331] Highly conserved protein containing a thioredoxin domain

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.926575
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCACG CCGCTACAGG CTCGGGCCGT CCCGCGAATC GCTTGGCTGC GGAAACGAGC 
CCCTATCTGC TGCAGCACCA GCACAATCCC GTCGACTGGT GGCCGTGGGG ACCCGCGGCG 
CTCGCCGAGG CGCAGCGGAC CAACCGTCCG ATCCTGCTGT CAATCGGCTA CGCCGCCTGT 
CACTGGTGCC ATGTCATGGC GCACGAAAGC TTTGAGGACG ACGAAGTCGC CGCGGTGATG 
AACGAACTGT TCGTCTGTAT CAAGGTCGAT CGCGAGGAGC GGCCGGATAT CGATCAGATC 
TACATGAACG CGCTGCATCT TCTCGGCGAG CAGGGCGGCT GGCCGCTGAC GATGTTCCTG 
TCGCCCGACG GATCGCCGTT CTGGGGCGGC ACATATTTTC CGAAGCTGCC AGACTTCGGC 
CGCCCGGCAT TTACCGATGT GTTGCAGTCA GTGGCGCGGG TTTTTCACGA CAAACCCGAG 
AGGGTCACGC TGAACCGCGA TGCGGTGATC GCACGGCTCT CCGAGCGCGC TAAAGTGGGA 
AGTCCGGCGA ACCTCGGCGT CGCCGAACTC AACACCGCGG CCGTCTCCAT CGCGCGTTCA 
ACCGATCCGG TCAACGGCGG CCTACACGGC GCGCCGAAGT TTCCGCAATG CTCCGTGCTG 
GAATTTCTCT GGCGCGCCGG CGCGCGCACC GGAAGCGACC GTTTCTACGC AGCTACCACG 
CTGACCCTGA CGCAGATGAG CCAGGGCGGC ATCTACGATC ACCTCGGCGG CGGCTACGCG 
CGCTATTCGG TCGACGACAG ATGGCTGGTG CCGCACTTCG AGAAGATGCT TTACGACAAC 
GCGCAGATTC TCGATCTGCT CGCGCTCGAC TACGCGCGCA GCAAAAACCC GCTGTACCGC 
GAACGCGCGA TCGAGACCGT CGCTTGGCTG CTCCGGGAAA TGCTGACGGG CGAGGGCGGC 
TTTGCCTCCT CACTCGACGC CGACTCCGAA GGCAAGGAGG GCAAGTTCTA TGTCTGGTCG 
CTGAGCGAGA TCGAAGAGGT GCTCGGCGCT ACCGACGCCG CCGATTTTGC CGCGCGATAT 
GACATCACCG CAAACGGCAA TTTCGAAGGC CGCAACATTC CCAATCGTCT GAAGAGTTCT 
GATCTCGTCA GCGATGACGG CGCCCACATG CGGACGCTGC GCGCGAAACT GCTGGCGCGC 
CGCGCAGGCC GCGTCCGTCC GGGACTCGAC GACAAGGTTC TCGCCGACTG GAACGGCTTG 
ATGATCGCGG CACTCGTCCA CGGAGCCTGC GCCTTCGGCT TGCCGGACTG GCTGGAAACC 
GCCCGCACGG CCTTCGAGTT CATCCGGAAG ACAATGACGC GCGGCGACCG GCTCGGCCAT 
TCCTGGCGCG AGGGCCGGCT GCTGGTGCCG GCGCTGGCTT GCGACTATGC CGCGATGGTC 
CGCGCCGCGC TCGCGTTGAG TGAGGCGACC GGCGACACCG CGTATCTGGA GCAGGCGCTG 
CGCTGGCAGG CCACCCTTGA CACCCATTAC GCCGACGTCG AGCACGGCGG CTATTATCTC 
ACGGCCGACG ACGCGGAGGG GCTGATCGTG CGGCCGCACT CGACAATCGA CGATGCCATC 
CCGAACTATA ACGGACTGAT TGCGCAAAAC CTGGTGCGCC TCGCGGCGCT GACCGGCGAT 
TCGAAGTGGC GCGACCGGAT CGACGCCCTG TTCGGCGCGC TGCTGTCCCG CGCGGCCGAG 
AACGGCTTTG GCCATCTGGC GCTACTGAGT GCGCTCGACC TCCGTCTGAC CGGTGCGGAA 
ATCGTCGTGG TCGGCGAGGG TGCACAAGCC GAAGCGCTGC TCGCCGCCGC GCGCGCGCTG 
CCGCACGCCA CGAGCATCGT GCTTCATGTA TCGCGTGGCG ATGCGCTGCC GGCCGAACAT 
CCGGCGCGCG CCAAGGCCGA TTCCGTGCAA GGCGCGGCAG CGTTCGTGTG CCGCAATCAA 
AGTTGCTCGT TGCCGGTAAC GACGCCGCAG GCGCTTGTCG ATCTGGTGAT GCAGCGAACC 
TCTGCATAG 

 

Protein sequence

MNHAATGSGR PANRLAAETS PYLLQHQHNP VDWWPWGPAA LAEAQRTNRP ILLSIGYAAC 
HWCHVMAHES FEDDEVAAVM NELFVCIKVD REERPDIDQI YMNALHLLGE QGGWPLTMFL 
SPDGSPFWGG TYFPKLPDFG RPAFTDVLQS VARVFHDKPE RVTLNRDAVI ARLSERAKVG 
SPANLGVAEL NTAAVSIARS TDPVNGGLHG APKFPQCSVL EFLWRAGART GSDRFYAATT 
LTLTQMSQGG IYDHLGGGYA RYSVDDRWLV PHFEKMLYDN AQILDLLALD YARSKNPLYR 
ERAIETVAWL LREMLTGEGG FASSLDADSE GKEGKFYVWS LSEIEEVLGA TDAADFAARY 
DITANGNFEG RNIPNRLKSS DLVSDDGAHM RTLRAKLLAR RAGRVRPGLD DKVLADWNGL 
MIAALVHGAC AFGLPDWLET ARTAFEFIRK TMTRGDRLGH SWREGRLLVP ALACDYAAMV 
RAALALSEAT GDTAYLEQAL RWQATLDTHY ADVEHGGYYL TADDAEGLIV RPHSTIDDAI 
PNYNGLIAQN LVRLAALTGD SKWRDRIDAL FGALLSRAAE NGFGHLALLS ALDLRLTGAE 
IVVVGEGAQA EALLAAARAL PHATSIVLHV SRGDALPAEH PARAKADSVQ GAAAFVCRNQ 
SCSLPVTTPQ ALVDLVMQRT SA