Gene Nham_0105 details

Gene Information

• Locus tag: Nham_0105
• ID: 4029606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 120558
• End bp: 122432
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637968639
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_575466
• Protein GI: 92115737
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCAT CATTCGACGT CATCGTAATC GGGGGTGGCC ACGCCGGCTG CGAGGCCGCG 
ACCGCCGCTG CGCGAATGGG CGCACGGACA GCGCTCGTGA CCCATCGGCT TTCAACCGTC 
GGCGCGATGT CCTGCAATCC GGCGATCGGC GGGCTCGGCA AGGGCCATCT GGTCCGCGAA 
ATCGATGCGC TGGACGGGTT GATGGGTCGC GTGGCCGATG CCGCAGGCAT CCAGTTCCGG 
ATGCTCAATC GCCGCAAGGG CCCGGCGGTC CGTGGTCCGC GCGCCCAGGA AGACCGCAAG 
CTTTACGCCG CCGCGATGCA GGCCGAGATT CGCGAGGCCG CGAATCTGGT GGTGATCGAA 
GGCGAGGCGG ACGACCTCAT CGTTGCCGAC GGCAGGATCG CCGGCATTCG CCTGATCGAC 
AGCCGTGCGT TCAAGACCGG CGCGGTCGTC GTCACCACCG GCACCTTTCT GCGCGGCCTG 
ATCCATCTCG GCGAAAAGAG CTGGCCCGCG GGGCGGGTCG ACGAAGCGCC GGCGCTCGGC 
CTGTCTGTGT CTTTCGAGCG CATCGGCTTC ACGCTTGGCC GGCTCAAGAC CGGGACGCCG 
CCGCGGCTCG ACGGCGCCAC CATCGACTGG GCCGCGGTTG AAATGCAGCC GGGCGACGAT 
CCACCGGAGC CGTTTTCGGT GATGACCAGC CGAATCACCA CGCCGCAGAT CCGGTGCGGC 
ATCACCCGCA CCATGCCGGC GACTCACGAG GTGATTCGGG CCAATGTGCA TCGTTCGCCG 
ATATATTCCG GCCAGATCAG GAGTTCGGGA CCGCGCTATT GCCCGTCGCT TGAGGACAAG 
GTGGTCCGCT TCGGCGATCG CGACGGGCAC CAGATCTTTC TGGAGCCGGA AGGACTCGAC 
GACACCACGG TTTATCCGAA TGGCATCTCG ACCTCGTTGC CGGAGGAGGT GCAGCTCGCG 
ATCCTGGCGA CCATCCCCGG CCTGACGAAA GTCAGGATGA TCCGGCCGGG CTATGCCATC 
GAATACGATC ATGTCGACCC CCGCGAACTC GATCCGACCT TGCAGACCAG GCGGCTGCCC 
GGACTGTTCC TGGCCGGTCA GATCAACGGG ACCACCGGTT ATGAAGAGGC TGCGGCGCAG 
GGGCTTGTCG CCGGCCTGAA CGCGGCATTG GCCGCGGGCG GCGGCGATCC GGTCGTGTTC 
GACCGCGCCG ACGGTTATCT CGGCGTGATG ATCGATGACC TCGTGACCCG CGGGATCACC 
GAACCCTATC GGATGTTCAC CTCGCGCGCC GAATACCGGC TGACGCTGCG CGCCGACAAC 
GCCGATCAGC GGCTGACGGA CAAGGGCATT GCAATGGGCT GCGTCGGGGC AGGGCGCGCG 
GTCCATCATC GGGCCAAAAT GGCGGCCTTG AGCGCGGCGA AGGCCTTGGC GACGTCGCTG 
TCTGTCACGC CGAACGAGGC GGCCAGATAT GGCCTGTCGC TCAACCGCGA CGGCCATCGG 
CGGTCGGCGT TCGAGCTTTT GGCCTATCCG GAGATCGGGT GGGGCGAGGT GGCCGCGATC 
TGGCCGGAAC TGTCGGCCAT CGATCCGGGA GTCGCCGTGC ATCTGGAGAT CGATGCCAAA 
TACGATGTCT ATCTGAAGCG CCAGACCGCT GATGTCGAAG CGTTTCGTCG TGACGAAAGC 
CTCGTGCTCG CCGATGTCGA TTATGATGCC GTGCCGGGGC TGTCCAATGA GGCGAGGGCC 
AGGCTCGAAC GCGCCCGGCC CCGGACCGTC GGGCAGGCGG GTCGCCTCGA CGGCATCACC 
CCGGCGGCGC TCGGGATTCT GGCGGCCTAT TTGCGCCGCG AGGCGCGGAA GAAAACGGCC 
ACAGCATCGG CCTAG 

 

Protein sequence

MTASFDVIVI GGGHAGCEAA TAAARMGART ALVTHRLSTV GAMSCNPAIG GLGKGHLVRE 
IDALDGLMGR VADAAGIQFR MLNRRKGPAV RGPRAQEDRK LYAAAMQAEI REAANLVVIE 
GEADDLIVAD GRIAGIRLID SRAFKTGAVV VTTGTFLRGL IHLGEKSWPA GRVDEAPALG 
LSVSFERIGF TLGRLKTGTP PRLDGATIDW AAVEMQPGDD PPEPFSVMTS RITTPQIRCG 
ITRTMPATHE VIRANVHRSP IYSGQIRSSG PRYCPSLEDK VVRFGDRDGH QIFLEPEGLD 
DTTVYPNGIS TSLPEEVQLA ILATIPGLTK VRMIRPGYAI EYDHVDPREL DPTLQTRRLP 
GLFLAGQING TTGYEEAAAQ GLVAGLNAAL AAGGGDPVVF DRADGYLGVM IDDLVTRGIT 
EPYRMFTSRA EYRLTLRADN ADQRLTDKGI AMGCVGAGRA VHHRAKMAAL SAAKALATSL 
SVTPNEAARY GLSLNRDGHR RSAFELLAYP EIGWGEVAAI WPELSAIDPG VAVHLEIDAK 
YDVYLKRQTA DVEAFRRDES LVLADVDYDA VPGLSNEARA RLERARPRTV GQAGRLDGIT 
PAALGILAAY LRREARKKTA TASA