Gene Nham_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0088 
Symbol 
ID4029627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp101377 
End bp102597 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content69% 
IMG OID637968622 
Product2-octaprenyl-6-methoxyphenyl hydroxylase 
Protein accessionYP_575449 
Protein GI92115720 
COG category[H] Coenzyme transport and metabolism
[C] Energy production and conversion 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.231112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAC AACGGAGCAT TGTCATCTGC GGCGGCGGGT TCGCGGGCCT GGCGCTGGCG 
CTGGCGCTGC GCCAGGGGTT GGGCGCCGGG GTTCCGATCG TGGTCGCCGA TCCCGCGCTG
GCGAACCGGT CGAGCCGCGA TCCGCGCGCC ACCGCAATCG TAGCGGCATG CCGCCGCCTG
TTCGAGGCGC TCGGGGTCTG GGACGAGGTG GCCGGGACCG CGCAGCCGAT CCTCGACATG
GTGATCACGG ATTCCAGGCT CGAGGACGCC ACCCGCCCGG TATTTTTGAC ATTTGCCGGC
GACGTCGAGC CCGGCGAGCC GTTCGCGCAT ATGATCGAGA ACGGTCACCT GATCGAGGCG
CTGGTGTCAC GCGCGAGCGC CGAAGGCGTC GATTTGCGCG CCACGGCGGT GACGGGATCC
GACCTGCGAT CCGGCGGCGT CATGGTCTCG CTCGCCGACG GCGCGACGAT CGACGCCAGC
CTGCTGGTGG CGGCCGACGG CGCGCGCTCA AGGCTGCGCG AGCGCGCCGG AATCGCCACC
CACGGCTGGG AGTACGATCA GTCCGGCATC GTCGTCACCG TCGGCCACGA GCGCGATCAT
CAGGGCCGCG CCGAAGAACA TTTTCTCCCC GCCGGACCGT TCGCGATCCT GCCGCTGACC
GGCCGCCGCT CGTCGCTGGT GTGGACCGAG AAGCGGGCGG ACGCCGCGCG CATCGTCGCG
CTCGCGGAAG AGGACTTTCA TGCCGCGCTG GAACAGCGCT TCGGCCTACA CCTCGGCGAG
ATCAAAGCGC TCGACAAGCC GCGCGCTTTT CCGCTTCATT ATTTCGTCGC ACGCTCGTTC
ATAGCGGAGC GACTGGCGCT GGTCGGCGAC GCCGCGCATG TGATTCACCC GATCGCGGGC
CAGGGCCTCA ACCTCGGACT GAAGGATGTC GCGGCGCTCG CGGAAACCGT GGTCGATGCC
GTCAGGCTCG GCATCGATCC GGGGCAAGCC GATGTGCTGG AGCGCTATCA GCGCTGGCGG
CGCTTCGACA CCGTGGCGAT GGGCTTCGCC ACCAACACGC TCAATGTGCT GTTCTCGAAC
GAATCGACGC TGCTGCGCGG CGTGCGCGAT ATCGGGCTCG GTCTGGTCGA CCGGATGCCG
CCGCTGAAGA ATGCGTTCAT CCGGCAGGCG GCGGGACTGA CCGGCGAGGT ACCGCGGCTG
TTGAAGGGCG AGGCGCTGTA G
 
Protein sequence
MTTQRSIVIC GGGFAGLALA LALRQGLGAG VPIVVADPAL ANRSSRDPRA TAIVAACRRL 
FEALGVWDEV AGTAQPILDM VITDSRLEDA TRPVFLTFAG DVEPGEPFAH MIENGHLIEA
LVSRASAEGV DLRATAVTGS DLRSGGVMVS LADGATIDAS LLVAADGARS RLRERAGIAT
HGWEYDQSGI VVTVGHERDH QGRAEEHFLP AGPFAILPLT GRRSSLVWTE KRADAARIVA
LAEEDFHAAL EQRFGLHLGE IKALDKPRAF PLHYFVARSF IAERLALVGD AAHVIHPIAG
QGLNLGLKDV AALAETVVDA VRLGIDPGQA DVLERYQRWR RFDTVAMGFA TNTLNVLFSN
ESTLLRGVRD IGLGLVDRMP PLKNAFIRQA AGLTGEVPRL LKGEAL