Gene Nham_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0084 
Symbol 
ID4029623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp97735 
End bp99084 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content67% 
IMG OID637968618 
Productammonium transporter 
Protein accessionYP_575445 
Protein GI92115716 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTCG AACGCCCGGC CCGCGCGGGA TTGGCCATCG CAGCGATACT AGGCGCGGCC 
GGCCTTGCGG GATTCGCCGA CACAGCACTG GCCCAGACCG CGGTAGCGGT CGCCCCCGCC
GCGACATCGC CGCCGAAAAT CGATTCGGGC GACACCGCAT GGATGCTGAC CGCCACCGCG
CTCGTCTTGA TGATGACGAT CCCTGGCCTG GCGCTGTTTT ACGGCGGCAT GGTGCGCAAG
AAGAACGTGC TTGCCACGGT GATGCAGAGC TTCGCCATCG CCTGCCTTGT TAGCGTGCTC
TGGATGGTGA TCGGCTATAG CTGGGCGTTC ACCGAAGGCA CGAATTTTCT CGGCGGCGCC
TCGCGGATGC TGCTGATGGG CATGGGCACC GACTCCATCG CCGCCGCCGC GCCGACGATC
CCGGAATCGG TGTTCATGTG CTTCCAGATG ACGTTCGCGA TCATCACGCC GGCGCTGATC
TGCGGCGCGA TCGCCGATCG CATGAAGTTC TCGGCGATGA TGTGGTTCAT GGGCCTGTGG
TCGCTGCTGG TCTATGCGCC GATCGCGCAC TGGGTATGGG GCGGCGGATT CCTCGGTGGT
CTCGGCGTGC TCGACTTCGC CGGCGGCACC GTGGTTCACA TCAACGCCGG CGTCGCGGGG
CTGGTCTGCG CGCTGGTGCT CGGCAAGCGC AAGGGCTACG GCAGCGAGAA CATGGCGCCG
CACAACCTGG TGCTGACTGT GATCGGCGCG TCGCTATTAT GGGTCGGCTG GTTCGGTTTC
AACGCCGGTT CGGCGGTGAC GGCGGGCGGA CAGGCCGGCA TGGCGATGGC GGTGACCCAG
ATCGCGACCG CTGCCGCGGC GCTGGCCTGG ATGGCCGTCG AGTGGGGCTT GCGCGGCCAG
CCGAGCGTGC TCGGCATCTG CTCCGGCGCG GTCGCCGGTC TCGTCGCCAT CACCCCGGCT
TCGGGCTTCG TCGATCCAAC CGGCGCGCTG GTGATCGGCG CCGCCGCCGG CGTCGGCTGC
TACTGGGGCG CCACCGGCCT CAAGCACATG ATGGGCTATG ACGACAGCCT CGACGCCTTC
GGCGTCCACG GCGTCGGCGG CATCATCGGC GCGCTGCTCA CCGGCGTGTT CGCCCGCACG
GCGATCAACA AGGCAGGGAC GGGCCTGATC GACGGCAACG CCCATCAGGT GGTCATTCAG
ATCTACGGCA TCCTCGCAAC CGTCGTCTAC GACGCCATCG TCACGCTGAT CATCCTGCTG
GCCATCAAGG CGGTGATCGG CCTGCGCGTC AGCGGCGAGA ACGAACGCGA AGGTCTCGAC
ATCACCCAGC ACGGCGAGGT CGTGCAATGA
 
Protein sequence
MRFERPARAG LAIAAILGAA GLAGFADTAL AQTAVAVAPA ATSPPKIDSG DTAWMLTATA 
LVLMMTIPGL ALFYGGMVRK KNVLATVMQS FAIACLVSVL WMVIGYSWAF TEGTNFLGGA
SRMLLMGMGT DSIAAAAPTI PESVFMCFQM TFAIITPALI CGAIADRMKF SAMMWFMGLW
SLLVYAPIAH WVWGGGFLGG LGVLDFAGGT VVHINAGVAG LVCALVLGKR KGYGSENMAP
HNLVLTVIGA SLLWVGWFGF NAGSAVTAGG QAGMAMAVTQ IATAAAALAW MAVEWGLRGQ
PSVLGICSGA VAGLVAITPA SGFVDPTGAL VIGAAAGVGC YWGATGLKHM MGYDDSLDAF
GVHGVGGIIG ALLTGVFART AINKAGTGLI DGNAHQVVIQ IYGILATVVY DAIVTLIILL
AIKAVIGLRV SGENEREGLD ITQHGEVVQ