Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0077 |
Symbol | infC |
ID | 4029653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 88906 |
End bp | 89421 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637968610 |
Product | translation initiation factor IF-3 |
Protein accession | YP_575438 |
Protein GI | 92115709 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.646828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTCG CGAAAGACGG GCCGCGCACC AACGATGAAA TCCGCAATGC CCAGGTTCAA CTGATCGACC AGGAAGGCAC CAACCAAGGG ACCGTGGAAA CGATCTCTGC GATCAAGATG GCCATGGATG CCGGCATGGA TCTGGTCGAG ATTGCGCCGA ACAGCAGCCC TCCCGTCTGC AAGATCATGG ACTACGGGAA ATACAAGTTT CAGGCCCAGA AGAAAGCCGC CGAAGCCCGC AAGCGCCAGA AGATCGTCGA GATCAAGGAG ATCAAGCTCC GTCCGATGAT CGACGATCAC GATTATAACG TGAAGATGAA GGCGATGCAG CGGTTCTTCG AGGAGGGCGA CAAGGTCAAG ATCACCCTGC GCTATCGCGG CCGCGAGATG GCTCACCAGG ACATCGGCAC CAAGCTGCTC GACAAGGTGA AGACCGACGT TGCCGCCTAC GCCAAGGTCG AGCAGGACGC CAGGTTCGAA GGCCGTCAGG TCGTCATGGT GCTGGCTCCG CGCTGA
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Protein sequence | MPVAKDGPRT NDEIRNAQVQ LIDQEGTNQG TVETISAIKM AMDAGMDLVE IAPNSSPPVC KIMDYGKYKF QAQKKAAEAR KRQKIVEIKE IKLRPMIDDH DYNVKMKAMQ RFFEEGDKVK ITLRYRGREM AHQDIGTKLL DKVKTDVAAY AKVEQDARFE GRQVVMVLAP R
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