Gene Nham_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0077 
SymbolinfC 
ID4029653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp88906 
End bp89421 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content59% 
IMG OID637968610 
Producttranslation initiation factor IF-3 
Protein accessionYP_575438 
Protein GI92115709 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.646828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTCG CGAAAGACGG GCCGCGCACC AACGATGAAA TCCGCAATGC CCAGGTTCAA 
CTGATCGACC AGGAAGGCAC CAACCAAGGG ACCGTGGAAA CGATCTCTGC GATCAAGATG
GCCATGGATG CCGGCATGGA TCTGGTCGAG ATTGCGCCGA ACAGCAGCCC TCCCGTCTGC
AAGATCATGG ACTACGGGAA ATACAAGTTT CAGGCCCAGA AGAAAGCCGC CGAAGCCCGC
AAGCGCCAGA AGATCGTCGA GATCAAGGAG ATCAAGCTCC GTCCGATGAT CGACGATCAC
GATTATAACG TGAAGATGAA GGCGATGCAG CGGTTCTTCG AGGAGGGCGA CAAGGTCAAG
ATCACCCTGC GCTATCGCGG CCGCGAGATG GCTCACCAGG ACATCGGCAC CAAGCTGCTC
GACAAGGTGA AGACCGACGT TGCCGCCTAC GCCAAGGTCG AGCAGGACGC CAGGTTCGAA
GGCCGTCAGG TCGTCATGGT GCTGGCTCCG CGCTGA
 
Protein sequence
MPVAKDGPRT NDEIRNAQVQ LIDQEGTNQG TVETISAIKM AMDAGMDLVE IAPNSSPPVC 
KIMDYGKYKF QAQKKAAEAR KRQKIVEIKE IKLRPMIDDH DYNVKMKAMQ RFFEEGDKVK
ITLRYRGREM AHQDIGTKLL DKVKTDVAAY AKVEQDARFE GRQVVMVLAP R