| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0069 |
|---|
| Symbol | |
|---|
| ID | 4029645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 80250 |
|---|
| End bp | 80744 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637968602 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_575430 |
|---|
| Protein GI | 92115701 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCG CCGACGTCCC CGCTCCCGAA CTTGCCGTGT CGCAATGGTT CAACACCGGC
GAACCGCTGA CGCTGGCCGC GCTGCGCGGC CGCCCGGTGC TGCTCCATGC CTTCCAGATG
CTGTGTCCCG GCTGCGTCGC GCATGGCACG CCGCAGACGC AGCGCGCCTT TGAGCTGTTC
AAGGCGACCG ACCTCCAGGT GATCGGCCTG CACACGGTGT TCGAACATCA CGCCGCGATG
ACGCCGGTTT CGCTTCAAGC CTTCATTCAC GAATATGGGC TGACGTTTCC GATCGGTGTC
GACGCCGCCG GCGAAGGCAC CCCGCTGCCG GTCACCATGA GCCGCTATCG GATGCAGGGC
ACGCCGACCA GCATCCTGAT CGGCCGCGAC GGCCGCATCG TTCATCACGG CTTCGGCCAG
CAGAGCGACA TGGCGCTCGG CGCCATGATC GCGGCCGAAC TTGCGGGCGC GCAGACCTAT
GCCGCCAAGG CGTGA
|
|---|
| Protein sequence | MTGADVPAPE LAVSQWFNTG EPLTLAALRG RPVLLHAFQM LCPGCVAHGT PQTQRAFELF
KATDLQVIGL HTVFEHHAAM TPVSLQAFIH EYGLTFPIGV DAAGEGTPLP VTMSRYRMQG
TPTSILIGRD GRIVHHGFGQ QSDMALGAMI AAELAGAQTY AAKA
|
|---|
| |