Gene Nham_0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0051 
Symbol 
ID4029761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp56591 
End bp58030 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content67% 
IMG OID637968584 
Productbifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_575412 
Protein GI92115683 
COG category[R] General function prediction only
[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase
[COG4691] Plasmid stability protein 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0750975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGTC TCACCGTCCG CAAACTCGAC GACGCCATCA AGGCCGAGCT GCGACTGCGC 
GCCGCCCGCA ACGGCCGTTC GGTCGAGGAT GAGGTCCGCG TTATCCTGAG GGAGGCGGCA
ACCGTCACGT CCTCGACCGT CGCCACGGGC AATCGCGCCG CCCGCAATGC AGCAATCCCA
GCCGGCCGAA ATTCATTCCA TCAGTCCAAT GGCTTGCGTA ACATAACGCT GATCATCGGC
GGCGGTATTG CCGCCTACAA GGCGCTCGAT CTGATCCGGC GGCTGAAGGA GCGCGGCTTT
ATTGTGCGGT GCGTCATGAC GAATGCTGCG CAGCAATTCG TCACCCCGCT GAGCGCCGGC
GCGCTGGCCG GCACCCACGC CTACACCGAC CTGTTCGATC CCGGCAGCGA ATTCGATGCC
GGCCATATCC GGCTCGCGCG CGACTGCGAC CTGATCGTGG TGGCGCCCGC CACCGCCGAC
CTGATGGCAA AGATGGCGCA CGGGTTGGCC TCCGATCTCG CCACCGCGAT CCTGCTCGCC
GCCGACAAGC CGATCCTGCT GGCGCCGGCG ATGAACCCGC TGATGTGGAA CAACCCGGCG
ACACGCCGCA ACGTGGCGCA GCTCGCGCGC GACGGCGTCG CGATGATCGG CCCCAATGCC
GGCAAGATGG CGGAAGCCGG CGAGGCCGGC GTCGGCCGCA TGGCCGAGCC GACGGAGATC
GCGACAGCGG CCGCGCGGAT TCTCGGACCC GCGCGACCGC AACCGCTCGA GGGCAAGCGT
GTGCTGGTCA CGGCCGGTCC AACCCGCGAG CCGATCGATC CGGTGCGCTA TATCGCCAAC
CGTTCTTCCG GCAAGCAGGG GTTTGCCATT GCTGCGGCGG CGCAGGCGGC CGGGGCCGAG
GTGACGCTGA TTTCGGGGCC GGTCGATCTC GACGATCCCG CAGGCGTCAC GGTGGCGCAC
GTCGAATCGG CGCGAGAGAT GCTGGCGGCG GTCGAAGCGG CACTGCCCGC CGACATCGCG
ATCTTCACGG CCGCGGTCGC CGACTGGCGG GTCGCCCACG AAGGCGCGCA GAAACTGAAG
AAGACCGCGG CCGGGATGCC GCCGCTGCAA CTGGTCGAGA ACCCCGACAT TCTGGCAACG
ATCTCGAAGC TGCGCGACAC GCGTCCGCCT CTCGTTATCG GTTTCGCCGC CGAAACCGAG
CATCTCATCG ACAACGCCAG GGCAAAATTC GCGCGCAAGG GCTGCGACTG GATGGTCGCC
AACGACGTCT CGCCCGGGAC CGGCGTGATG GGCGGCGATC GCAACACGGT GCATTTGCTG
ACGCGTGACG GGGTCGGCGA CGAGATCAAG GCCGAGTCCT TTCCCGTCAT GACCAAGGAA
GATGTTGCCG CAATGCTGAT CGAACGCATC GTCTCGACCG TGACGGATCA GCCGACATGA
 
Protein sequence
MASLTVRKLD DAIKAELRLR AARNGRSVED EVRVILREAA TVTSSTVATG NRAARNAAIP 
AGRNSFHQSN GLRNITLIIG GGIAAYKALD LIRRLKERGF IVRCVMTNAA QQFVTPLSAG
ALAGTHAYTD LFDPGSEFDA GHIRLARDCD LIVVAPATAD LMAKMAHGLA SDLATAILLA
ADKPILLAPA MNPLMWNNPA TRRNVAQLAR DGVAMIGPNA GKMAEAGEAG VGRMAEPTEI
ATAAARILGP ARPQPLEGKR VLVTAGPTRE PIDPVRYIAN RSSGKQGFAI AAAAQAAGAE
VTLISGPVDL DDPAGVTVAH VESAREMLAA VEAALPADIA IFTAAVADWR VAHEGAQKLK
KTAAGMPPLQ LVENPDILAT ISKLRDTRPP LVIGFAAETE HLIDNARAKF ARKGCDWMVA
NDVSPGTGVM GGDRNTVHLL TRDGVGDEIK AESFPVMTKE DVAAMLIERI VSTVTDQPT