Gene Nham_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0045 
Symbol 
ID4029755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp49669 
End bp50670 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content66% 
IMG OID637968578 
Productglycolate reductase 
Protein accessionYP_575406 
Protein GI92115677 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only
[C] Energy production and conversion 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTGA AGAAGAAGCC TCTGGTTGTC GTCACGCGCA AGCTGCCGGA CTCGATCGAG 
ACCCGCATGC GCGAACTGTT CGACGCGCGG CTCAATCTCG ACGACCAGCC GATGACGCCC
GAACAACTCA TGGAGGCCGT CCGCACCGCG GATATCCTGG TTTCGACGGT AACCGACGAG
ATCACCGGAA ACGTCCTGAA ACAGCCGGAC TGCAAGGTGA AGCTGATCGC GCAGTTCGGC
AACGGCGTCG ACAATATCGA TGTCGTCGCC GCGCACGAGC GCGGCATCAC CGTCACCAAC
ACGCCGAACG TTCTCACCGA AGACACCGCC GACATGACCA TGGCGCTGAT TCTCGCGGTG
CCGCGCCGCT TCATCGAGGG CGCCGCCATG CTGACCGCCG GCGGCGACTG GCCGGGCTGG
TCGCCGACCT GGATGCTCGG CCGTCGGTTA GGGGGCAAGC GGCTCGGCAT CATCGGCATG
GGCCGTATCG GCCAGGCGGT GGCACGCCGC GCCCGCGCCT TCGGCCTGCA GATTCACTAC
CACAACCGCA AGCCGGTGGC GCCGAAGATC GCCGACGAAC TCGGCGCGAC CTATTGGGAT
TCGCTCGATC AGATGCTGGC GCGGATGGAC ATCATCTCGG TGAACTGTCC GCATACCCCG
GCCACCTTCC ATCTGCTGTC GGCGCGCCGC CTCAAGCTGA TCCGCAGGGA CGCCTATGTC
GTCAACACCG CGCGCGGCAC GGTAATCGAC GAGGACACGC TGACCAGGCT GATCGAGGCC
GGCGAGATCG CCGGCGCGGC CCTCGACGTG TTCGAGCACG AACCCGCGGT CAACCCGAGG
CTGGTCCGCC TCGCCAAGGC CGGCAAGGTC GTGCTGCTGC CGCATATGGG CTCCGCCACC
ATCGAGGGCC GGGTCGAGAT GGGCGAGAAG GTCATCATCA ACATCCGCAC CTTCCTCGAC
GCCCACAAGC CGCCGGACCG CGTGCTGCCG AACATGTTGT AA
 
Protein sequence
MPVKKKPLVV VTRKLPDSIE TRMRELFDAR LNLDDQPMTP EQLMEAVRTA DILVSTVTDE 
ITGNVLKQPD CKVKLIAQFG NGVDNIDVVA AHERGITVTN TPNVLTEDTA DMTMALILAV
PRRFIEGAAM LTAGGDWPGW SPTWMLGRRL GGKRLGIIGM GRIGQAVARR ARAFGLQIHY
HNRKPVAPKI ADELGATYWD SLDQMLARMD IISVNCPHTP ATFHLLSARR LKLIRRDAYV
VNTARGTVID EDTLTRLIEA GEIAGAALDV FEHEPAVNPR LVRLAKAGKV VLLPHMGSAT
IEGRVEMGEK VIINIRTFLD AHKPPDRVLP NML