Gene Nham_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0041 
Symbol 
ID4029751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp45427 
End bp46650 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content63% 
IMG OID637968574 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_575402 
Protein GI92115673 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGGG TTGTCGTCAC GGGGATGGGT ATTGTCTCGT CCATCGGAAA CAACACTCAG 
GAAGTGCTGT CCAGTCTCTT TGAGGCGAAG TCCGGCATCA CGCGCGCGGA CAAGTATGCG
GAGCTTGGCT TTCGCTCTCA GGTGCAGGGT GCGCCGACGC TGAATCCGGC CGATGTGATC
GATCGCCGCG CAATGCGCTT TTTGGCGGAG GGCGCGGCGT GGAATCACGT CGCGATGGAG
CAGGCCATTC GCGACTCGGG CCTGGAACCC ACTGACATCT CCAACGAGCG CACCGGAATC
ATCATGGGCT CCGGCGGCCC GTCCGCGCGC ACGATTGTGG AAGCGGCCGA CATCACCCGC
AGCAAGGGAC CCAAGCGCGT CGGTCCGTTC GCGGTGCCGA AGGCGATGTC GTCCACCGCG
TCGGCGACGC TCGCCACCTG GTTCAAGATC AAGGGTGTCA ACTACTCGAT CTCGTCGGCC
TGCGCGACCT CCAATCATTG CATCGGCAAT GCCTTTGAGA CCATTCAGAT CGGCAAGCAG
GACATCGTTT TCGCCGGCGG CTGCGAGGAA CTCGACTGGT CGCTGTCGGT GCTGTTCGAC
GCCATGGGTG CGATGTCCTC GAAATACAAC GACACGCCGG CGACGGCCTC GCGGGCCTAT
GACGTCAGTC GCGATGGCTT CGTGATCGCC GGCGGCGCCG GCGTGGTGGT TCTGGAAGAA
CTCGAACACG CCAAGGCCCG CGGCGCGCGC ATCTACGGAG AGGTCGTCGG CTATGGCGCG
ACCTCGGACG GCTACGACAT GGTCGCGCCG TCGGGCGAGG GCGCCGAGCG CTGCATGAGG
ATGGCGATGT CGACGGTGAA AACGAAAGTC GACTACATCA ACCCGCACGC GACCTCGACG
CCAGCCGGCG ATCCGCCGGA AATCGAGGCG ATCCGCAAGG TGTTCGGTAC CGGCGAGAAG
TGTCCGCCGA TTTCCGCCAC CAAGTCGCTG ACGGGGCATT CGCTCGGCGC GACCGGCGTG
CAGGAGGCGA TTTATTCGCT GCTGATGATG AACAACGGCT TCATCTGCGA AAGCGCCAAC
ATCACCGAAC TCGATCCGGC GTTCGCGGAC ATGCCGATCG TGCGTAAGCG TATCGATAAC
GCCAGGGTTG GCACGGTGAT GTCGAATTCG TTCGGTTTCG GCGGGACCAA TGCCACGCTG
GTGTTCAAAC GACTGGATGC GTGA
 
Protein sequence
MRRVVVTGMG IVSSIGNNTQ EVLSSLFEAK SGITRADKYA ELGFRSQVQG APTLNPADVI 
DRRAMRFLAE GAAWNHVAME QAIRDSGLEP TDISNERTGI IMGSGGPSAR TIVEAADITR
SKGPKRVGPF AVPKAMSSTA SATLATWFKI KGVNYSISSA CATSNHCIGN AFETIQIGKQ
DIVFAGGCEE LDWSLSVLFD AMGAMSSKYN DTPATASRAY DVSRDGFVIA GGAGVVVLEE
LEHAKARGAR IYGEVVGYGA TSDGYDMVAP SGEGAERCMR MAMSTVKTKV DYINPHATST
PAGDPPEIEA IRKVFGTGEK CPPISATKSL TGHSLGATGV QEAIYSLLMM NNGFICESAN
ITELDPAFAD MPIVRKRIDN ARVGTVMSNS FGFGGTNATL VFKRLDA