| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0033 |
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| Symbol | truB |
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| ID | 4029800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 35466 |
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| End bp | 36704 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637968567 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_575395 |
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| Protein GI | 92115666 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGC AAAACAGCGC ATTCGATTCG CCCATCGCCG AACCGGACGC GCCTGAAAAA
AATAATTCTG ATCGCGGAAA TAATTTTTCC GACACACCGC CACATCACGA GGACGGCTCC
CTCTCCCGCT TGCAGGCAGA GACGAGCGGA GGTGGCTCCG AGAGGGTTGA GGTGGAGGGA
TTTTCCTCGC AGACCAACCA GGCGAGCGCC CACCCGGCGA GCGAGGCTCG CCACCCCCCT
CCCCGGCAAG CGGGAGAGGG AAGAAAGAAA CAGAACAATC AGCCGCGCCG TGACAAGCGC
GACGTGCACG GCTGGGTCGT TCTCGACAAG CCTGTCGGCA TGACCTCGAC CCATGCGGTG
GCGGTCGTGA AACGGCTGTT TTCGGCGAAG CGCGCCGGCC ACGCCGGTAC GCTGGATCCG
CTGGCCTCGG GCGGCCTGCC GATCGCGCTC GGCGAAGCCA CCAAAACCGT TCCTTTCGTC
ATGGACGGCC GCAAGCGCTA CCGCTTCACG GTGCAATGGG GCGAAGAGCG CGATACCGAC
GATACCGAGG GCCGGGTCAC GGCGACCAGC GAGAGCCGTC CCGCCGCGGA CGCAGTCCGG
GCGCTGCTGC CGCGCTTTAC CGGCGTGATC GAGCAGATCC CGCCGCAATA TTCGGCGATC
AAGATCCAGG GCGAACGGGC CTATGACCTC GCCCGCGACG GCGAGACCGT CGCGCTGCAG
CCGCGACCGG TCGAGATTCA TCACTTTACC CTGGTCGAAC ATACAGATGA CGGTCGCTCG
CTGTTCGAGG CCGAGTGCGG CAAGGGAACC TATGTGCGGG CGCTGGCTCG CGATATCGGC
CGGATTCTCG GCTGTTACGG CCATATCAGC GCGCTGCGGC GGACGCTGGT CGGCCCGTTC
GACGAAGCCG ACATGATTCC GCTGGAAGAA CTGGAGGCTT TGTGCAATAG AGCGGCATCC
GGCGAGGGAA GCCTCGCCGA CGCGCTTTTG CCCGTTGAGA CCGCGCTGGA CGACATCCCG
GCGCTGGCCG TCACTCGGGC TGATGCGGCA AGGCTCCATC GGGGCCAGGC CGTCTTGTTG
CGCGGACGGG ATGCGCCCCA GAGTAGCGGC ACTGTCTATG TCACGGTGGC GGGCCGTTTG
CTGGCTCTCG CCGAACTAGG GCACGGCGAA CTCATCCCCA AGCGCGTGTT CAACCTGACC
GGGCTGACAG CCAGTTCCGG CCGCAACGAA AGAGCTTGA
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| Protein sequence | MTTQNSAFDS PIAEPDAPEK NNSDRGNNFS DTPPHHEDGS LSRLQAETSG GGSERVEVEG
FSSQTNQASA HPASEARHPP PRQAGEGRKK QNNQPRRDKR DVHGWVVLDK PVGMTSTHAV
AVVKRLFSAK RAGHAGTLDP LASGGLPIAL GEATKTVPFV MDGRKRYRFT VQWGEERDTD
DTEGRVTATS ESRPAADAVR ALLPRFTGVI EQIPPQYSAI KIQGERAYDL ARDGETVALQ
PRPVEIHHFT LVEHTDDGRS LFEAECGKGT YVRALARDIG RILGCYGHIS ALRRTLVGPF
DEADMIPLEE LEALCNRAAS GEGSLADALL PVETALDDIP ALAVTRADAA RLHRGQAVLL
RGRDAPQSSG TVYVTVAGRL LALAELGHGE LIPKRVFNLT GLTASSGRNE RA
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