Gene Nham_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0031 
SymbolinfB 
ID4029798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp32305 
End bp34911 
Gene Length2607 bp 
Protein Length868 aa 
Translation table11 
GC content67% 
IMG OID637968565 
Producttranslation initiation factor IF-2 
Protein accessionYP_575393 
Protein GI92115664 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00487] translation initiation factor IF-2
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGATA CGAAAAATCC TGGCGACAAG ACTCTGAGCG TCGGCCCGAG CAAGACCTTG 
ACGCTCAAGC CGCGTGTCGA GCAGGGCACC GTGCGCCAGA GCTTCAGCCA CGGCCGTACC
AAGCAGGTGG TGGTCGAGAA ACGAGGCAAG CGCCGGATCG GTGGCGACGC TCCCGCCGCG
GAACCGGTGG CGGCCTCGGA GCCGACAGTC GCGAGAGCGC CCAGGATTCC GGTCCGTCCC
GCGCCGCCCG CCGCTTCGCG CGCCAATTCG GGCGTGGTGC TGCGGACGTT GACCGAGGAC
GAGCGCACCG CGCGCGCAAG CGCGCTGGCC GAAGCCAAGA TCCGTGCCGA GGAAGAGCGC
CGGATCGCCG AAGCCGAGGC TGCGCGCCGC AACAGCAAGG AAGGCATCGA ACAGGCAGAG
CGCGAGGCCG CCGAGGCCCG CCGCAAGGCC GAGGAAGAGC GTCACCGTCA GGAAGAGGAA
GCCAAACGCA AGGCCGAACT CGAAGCCAAG CGTCGTTTCG GCGAATCCGA GACCAAGGCC
GCACCGGCCA AAACCACGAC CACGACCACG CGCGCGGCAC CCCCGGCGCG CCCGGCTGCT
GTCGCCGCCG ACGGCAGCGA CGAGGAAGAG GCTCCGCGCC TGGTCCGCCG TCCCGGTGGC
GGCCCCGCAC GTCCCGTCGT CGCACCGAAG CCGGCCGCCA AGCCGGCGCC CGCCAAGCAG
CGCGGCCGTC TGACGCTGGT GACGGCGTTG AGCGCCGACG ACGTGCGCGA GCGATCGATC
GCCTCGTTCC GCCGCCGCAC CCAGCGCCTG AAGGGCCATG CCTCGAACGA ACCGAAGGAA
AAGCTGATCC GCGAGGTCAT CGTGCCGGAA GCGATCACCA TCCAGGAGCT CGCCAACCGC
ATGGCGGAGC GCGCAGTGGA CGTGATCCGG ATGCTGATGA AGCAGGGCGC GATGCACAAG
ATCACCGACG TGATCGATGC CGATACCGCG CAGTTGATCG CCGAAGAACT GGGCCACACC
GTCAAGCGCG TCGCCGCGAG CGACGTCGAG GAAGGCCTGT TCGATGCGGA TGACGATTCC
ACCGTTGTCG AACCGCGCTC GCCGGTCGTC ACCGTGATGG GTCACGTCGA CCACGGCAAG
ACCTCGCTGC TCGATGCCGT GCGCCACGCC AATGTGGTGT CGGGCGAAGC CGGCGGCATC
ACCCAGCACA TCGGCGCCTA TCAGGTCACC TCGCCGGACG GCAAGAAGAT CACCTTCATC
GACACCCCGG GCCATGCGGC GTTCACCGCG ATGCGCGCCC GCGGCGCCAA GGTCACCGAC
ATCGTCGTTC TGGTGGTCGC AGCCGATGAC GGGGTGATGC CGCAGACCGT CGAGGCCATC
AATCACGCCA AGGCCGCGAA GGTGCCGATG ATCATCGCGA TCAACAAGAT CGACAAGCCC
GACGCGAAGC CGGAGCGGGT GCGCACCGAA CTGTTGCAGC ACGAGGTGCA GGTCGAATCG
ATGGGCGGCC AGGTGATCGA CGTCGAGGTC TCGGCCAAGA ACAAGACCAA TCTCGACAAG
CTGCTGGAAA TGATCTCCCT GCAGGCCGAC CTGCTCGATC TCAAGACCAA TGCCTCGCGG
CCTGCCGAAG GCACCGTGAT CGAAGCCAAG CTGGATCGCG GCCGCGGCCC CGTCGCCACC
GTGCTGGTCC AGCGCGGCAC GCTGCGGGTC GGCGACATCA TCGTGGCCGG CGCCGAAATG
GGCCGCGTCC GCGCGCTGAT TTCGGATCAG GGCGAGACGG TCGACGAGGC CGGCCCGTCG
GTGCCGGTCG AGGTGCTGGG CTTCAATGGG CCGCCGGAGG CCGGCGACCG GCTTGCCGTG
GTCGAGAACG AAGCCCGCGC CCGCCAGGTC ACGAGCTATC GCGCCCACCA GAAGCGCGAA
AACGCCGCGG CCAGCAGCTC CGGGATGCGC GGCTCGCTCG AGCAGATGAT GTCGCAGCTC
AAAACCGCGG GCCGCAAGGA TTTCCCGCTG GTCATCAAGG CCGACGTGCA GGGTTCGCTG
GAGGCTATCC TCGGCTCGCT GGAGAAGCTC GGCACCGAGG AAGTCGCCGC GCGCATCCTC
CATGCCGGCG TCGGCGGCAT CAGCGAATCC GACGTCACGC TGGCGGAGGG CTTCAACGCC
GCGATCATCG GCTTCAGCGT TCGCGCCAAC AAGGAAGCCG CGGCCGCCGC CAAGCGCAAC
GGCATCGAAA TCCGCTACTA CAACATCATC TACGACCTCG TGGACGACGT GAAGAAGGCG
ATGAGCGGCC TGCTCGCGCC GACGCTGCGC GAAACCATGC TGGGCAACGC GGAGATCCTG
GAAGTGTTCA ACATCTCCAA GGTCGGCAAG GTGGCGGGTT GCCGTGTCAC TGACGGCAAC
GTGGAACGCG GCGCCAACGT CCGCCTGATT CGCGAAAACG TCGTGGTGCA CGAAGGCAAG
CTATCGACGC TGAAGCGTTT CAAGGACGAA GTGAAGGAAG TGCAGTCGGG CCAGGAATGC
GGCATGGCGT TCGAGAGCTA TCACGATATG CGCGTCGGCG ATGTCATCGA GTGCTATCGC
GTGGAGACCA TTCAGCGCTC GCTGTGA
 
Protein sequence
MVDTKNPGDK TLSVGPSKTL TLKPRVEQGT VRQSFSHGRT KQVVVEKRGK RRIGGDAPAA 
EPVAASEPTV ARAPRIPVRP APPAASRANS GVVLRTLTED ERTARASALA EAKIRAEEER
RIAEAEAARR NSKEGIEQAE REAAEARRKA EEERHRQEEE AKRKAELEAK RRFGESETKA
APAKTTTTTT RAAPPARPAA VAADGSDEEE APRLVRRPGG GPARPVVAPK PAAKPAPAKQ
RGRLTLVTAL SADDVRERSI ASFRRRTQRL KGHASNEPKE KLIREVIVPE AITIQELANR
MAERAVDVIR MLMKQGAMHK ITDVIDADTA QLIAEELGHT VKRVAASDVE EGLFDADDDS
TVVEPRSPVV TVMGHVDHGK TSLLDAVRHA NVVSGEAGGI TQHIGAYQVT SPDGKKITFI
DTPGHAAFTA MRARGAKVTD IVVLVVAADD GVMPQTVEAI NHAKAAKVPM IIAINKIDKP
DAKPERVRTE LLQHEVQVES MGGQVIDVEV SAKNKTNLDK LLEMISLQAD LLDLKTNASR
PAEGTVIEAK LDRGRGPVAT VLVQRGTLRV GDIIVAGAEM GRVRALISDQ GETVDEAGPS
VPVEVLGFNG PPEAGDRLAV VENEARARQV TSYRAHQKRE NAAASSSGMR GSLEQMMSQL
KTAGRKDFPL VIKADVQGSL EAILGSLEKL GTEEVAARIL HAGVGGISES DVTLAEGFNA
AIIGFSVRAN KEAAAAAKRN GIEIRYYNII YDLVDDVKKA MSGLLAPTLR ETMLGNAEIL
EVFNISKVGK VAGCRVTDGN VERGANVRLI RENVVVHEGK LSTLKRFKDE VKEVQSGQEC
GMAFESYHDM RVGDVIECYR VETIQRSL