Gene Nham_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0029 
SymbolnusA 
ID4029796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp29886 
End bp31496 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content65% 
IMG OID637968563 
Producttranscription elongation factor NusA 
Protein accessionYP_575391 
Protein GI92115662 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCTG TCAGCGCCAA TAAACTCGAA CTGCTGCAGA TTGCAGATGC GGTGGCGCGG 
GAAAAGTCCA TCGACCGCGG CATCGTGATC GCCGCGATGG AGGACGCCAT CGCCAAGGCG
GCGCGGGCGC GCTACGGCAG CGAGACCGAT GTTCATGCGG AGATTCACCC GAAGACCGGG
CAGCTCCAGC TCACCCGCCA CATGCTGGTG GTCGATGAGA TCGAGAATGC CGCGAACCAG
ATCTCGCTGA AGGACGCCCA GAGGGCCAAC CCGGGCGCAC AGATCGGCGA CACCATCGCC
GACACGCTGC CGCCGCTGGA ATATGGCCGC ATCGCCGCGC AGTCCGCCAA ACAGGTGATC
GTGCAGAAGG TGCGCGAGGC CGAGCGCGAC CGGCAGTATC AGGAATTCAA GGACCGCATC
GGCGACATCG TCAACGGCAT CGTCAAGCGT GTCGAATATG GCAGCGTCAT CGTCGACCTC
GGCCGCGGCG AGGCCGTGGT GCGGCGCGAC GAGATGCTGC CGCGCGAGGT GTTCCGCAAC
GGCGACCGCG TCCGCGCCTA TATTTTCGAC GTGCGGCGCG AAACCCGCGG TCCGCAGATC
TTCCTGTCGC GCACCCATCC GCAATTCATG GTGAAGCTGT TCACGCAGGA AGTGCCGGAA
ATCTACGACG GCATTGTCGA GATCAAGGCG GTGGCGCGCG ATCCCGGTTC TCGCGCGAAG
ATCGGCGTGA TTTCCCGGGA TTCCTCGGTC GATCCCGTTG GCGCCTGTGT CGGCATGCGC
GGCTCGCGGG TTCAGGCGGT CGTCAACGAA CTGCAGGGCG AGAAGATCGA CATCATACCG
TGGTCGCCGG ACATCGCGAC GTTCGTCGTC AACGCGCTGG CGCCGGCGGA AGTCGCGAAG
GTCGTGATCG ACGAGGACCG TGAGCGGATC GAGGTCGTGG TCCCCGACAC CAACAACCAG
TTGTCGCTGG CGATCGGACG GCGCGGACAG AACGTGCGCC TCGCCTCGCA ACTGACCGGC
TGGGACATCG ACATCCTGAC CGAGCAGGAG GAATCGGAGC GGCGCCAGGC CGACTTCGAG
AACGCGACCC GCATGTTCAT GGAAGCGCTC AACGTCGACG AGGTCGTGGG CCAGTTGCTG
GCGTCGGAAG GGTTTATGTC GGTTGAAGAG CTGACGCTGG TCGAAACGCG GGAACTCGCC
GGCATCGAGG GATTCGACGA CGAAACCGCA AACGAGCTGC AGAGCCGCGC CCGCGAATAT
CTGGAGCAGC TCGAGGCCGA ACTGGACAAC AGGCGCAAGG AGCTTGGCGT GGACGATGCC
CTGAAGACGG TGCCCGGCGT GACCTCGAAG ATGCTGGTGA AACTCGGCGA GAACGAGGTC
AGGACCGTCG AGGATCTGGC CGGCTGCGCC ACCGACGATC TGGTCGGTTG GACCGAGCGC
AAGGACGGCG AAGCGGTCAA GCACGCCGGC TATCTCGACG GCATCGAGGT CTCGCGCGAG
GACGCCGAGG CCATTATCAT GCAGGCGCGC CTGATCGCCG GCTGGATCAC CGAAGCCGAC
CTTGCGAAAT CGGCGGAGGA AGCCCCCGCC GCCGAAGATC AGCCGGCTTG A
 
Protein sequence
MAAVSANKLE LLQIADAVAR EKSIDRGIVI AAMEDAIAKA ARARYGSETD VHAEIHPKTG 
QLQLTRHMLV VDEIENAANQ ISLKDAQRAN PGAQIGDTIA DTLPPLEYGR IAAQSAKQVI
VQKVREAERD RQYQEFKDRI GDIVNGIVKR VEYGSVIVDL GRGEAVVRRD EMLPREVFRN
GDRVRAYIFD VRRETRGPQI FLSRTHPQFM VKLFTQEVPE IYDGIVEIKA VARDPGSRAK
IGVISRDSSV DPVGACVGMR GSRVQAVVNE LQGEKIDIIP WSPDIATFVV NALAPAEVAK
VVIDEDRERI EVVVPDTNNQ LSLAIGRRGQ NVRLASQLTG WDIDILTEQE ESERRQADFE
NATRMFMEAL NVDEVVGQLL ASEGFMSVEE LTLVETRELA GIEGFDDETA NELQSRAREY
LEQLEAELDN RRKELGVDDA LKTVPGVTSK MLVKLGENEV RTVEDLAGCA TDDLVGWTER
KDGEAVKHAG YLDGIEVSRE DAEAIIMQAR LIAGWITEAD LAKSAEEAPA AEDQPA