| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0021 |
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| Symbol | |
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| ID | 4029788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 21543 |
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| End bp | 22964 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637968555 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_575383 |
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| Protein GI | 92115654 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0287805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCGC CGCGCAAGCT GCATATCAAG TCCTACGGTT GCCAGATGAA CGTCTACGAC
GCCCAGCGCA TGGTGGATAC GCTGGCGGCG GAAGGTTTCG TCGAGACCGC GAGCGCCGAG
GAGGCGGATC TCGTCATTCT CAACACCTGC CACATCCGCG AGAAGGCGTC CGAGAAGGTC
TATTCCGAAC TCGGCAGGCT GCGCGCCGCC AAGGACCAGG CGGCACGCGA CGGCCGCGAG
ATGAGCGTTG TCGTCGCCGG CTGCGTCGCG CAGGCCGAAG GCGACGAGAT CATTCGCCGC
GCGCCGGTGG TCGATGTGGT GGTCGGCCCG CAAAGCTATC ATCATCTGCC GCAACTTCTG
GCGCGCGCCA AGGCCGACGG CCGCGCGCTC GAGACCGAAT TTCCGGTCGA GGACAAGTTC
GGCTTCCTGC CGCAGCCATC ACGGCAGGCG ATACGCGCCC GCGGCATCTC CGCATTCGTG
ACGGTGCAGG AAGGCTGCGA CAAGTTCTGC ACCTTCTGCG TCGTGCCCTA TACGCGCGGC
GCCGAGGTGT CGCGTCCGGT GGCGAAGATC GTCGAGGACG TGCAGCGCCT CGCCGACAAT
GGCGTGCGCG AGATCACCCT GATCGGACAG AACGTCAACG CCTATCATGG CGACGGCCCG
GACGGACGGC CCTGGCCGTT CGGCAAGCTG CTGCATCGCC TCGCCGACAT TCCGGGGATC
GTCCGGCTGC GCTACTCGAC CAGCCATCCC CGCGACGTCG AGGACTCGCT GATCGAGGCG
CACCGCGATC TCGGCGCGCT GATGCCGTTC GTGCATCTGC CGGTGCAGTC CGGCTCCGAC
CGCATCCTCG AGGCCATGAA TCGCAGACAT ACCGCTGATG ACTACCGCCG CGTTGTCGAC
CGGTTTCGCC ACGTCCGGCA GGATATCGCG TTCTCATCGG ACTTTATCGT CGGCTTCCCG
GGCGAAACCG AGCAAGATTT TACCGCGACC CTCGCGCTTG TCACGCAAAT CGGATACGCT
GGCGCCTATT CGTTCAAGTA TTCGCCGCGG CCCGGAACGC CAGCGGCGGA GATGAAGGAG
ACGGTGTCAA CGGCCGACAT GGACGAGCGA CTGGTGCGGC TTCAGAACCT GATCGACAGC
CAGCAATCCG CCTTCAACAG GGCTGCGGTT GGCACGACGG TTGATGTGCT GTTCGAACGC
GCCGCGCGCA ATCCCGGACA GATCGTCGGA CGCACCGCCT ATCTGCAACC CGCGCATGTC
GTGGCCTCAG CGGACATTAT CGGACAGATC CTGCCTGTGA CGGTCGCAAG CCTCGAGCGC
TACAGCCTGC TCGGCTCGCT GGCGTCAGCG CCGGCATCGC GTGCGTCTGC CGACGATGCT
CCGCCGGTGG GCGCGTCGTC TCCGGCGATC ATGGGAGTCT GA
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| Protein sequence | MTPPRKLHIK SYGCQMNVYD AQRMVDTLAA EGFVETASAE EADLVILNTC HIREKASEKV
YSELGRLRAA KDQAARDGRE MSVVVAGCVA QAEGDEIIRR APVVDVVVGP QSYHHLPQLL
ARAKADGRAL ETEFPVEDKF GFLPQPSRQA IRARGISAFV TVQEGCDKFC TFCVVPYTRG
AEVSRPVAKI VEDVQRLADN GVREITLIGQ NVNAYHGDGP DGRPWPFGKL LHRLADIPGI
VRLRYSTSHP RDVEDSLIEA HRDLGALMPF VHLPVQSGSD RILEAMNRRH TADDYRRVVD
RFRHVRQDIA FSSDFIVGFP GETEQDFTAT LALVTQIGYA GAYSFKYSPR PGTPAAEMKE
TVSTADMDER LVRLQNLIDS QQSAFNRAAV GTTVDVLFER AARNPGQIVG RTAYLQPAHV
VASADIIGQI LPVTVASLER YSLLGSLASA PASRASADDA PPVGASSPAI MGV
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