Gene Nham_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0020 
Symbol 
ID4029846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp20911 
End bp21360 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content60% 
IMG OID637968554 
Productferric uptake regulator family protein 
Protein accessionYP_575382 
Protein GI92115653 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0165645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCCC TGAAACCGAC GTCTGCGCAG ACATCCACCA CGATCGAGGC GCGTTGCGCC 
GCCACCGGAA TGCGCATGAC CGAACAGCGC CGGGTTATCG CGCGGGTGCT GGCGGAAGCC
TCCGATCATC CGGACGTCGA GGAACTCTAT CGCCGCTGCG TCGCGGTGGA TGACAAGATC
TCGATCTCGA CGGTCTATCG CACAGTCAAG CTGTTCGAGG ACGCCGGCAT CATCGAGCGG
CACGACTTTC GCGAAGGTCG CGCGCGCTAT GAGACGATGC GCGACAGTCA CCACGATCAT
CTGATCAACC TGCGTGACGG CACGGTGATC GAATTCACAT CGGATGAAAT CGAGAAACTG
CAAGCCGAAA TCGCTCGCAA ACTCGGCTAC AGGCTGGTCG ATCACCGGCT CGAACTCTAT
TGCGTCCCGA TGGACGACGA CAAGTCCTGA
 
Protein sequence
MTALKPTSAQ TSTTIEARCA ATGMRMTEQR RVIARVLAEA SDHPDVEELY RRCVAVDDKI 
SISTVYRTVK LFEDAGIIER HDFREGRARY ETMRDSHHDH LINLRDGTVI EFTSDEIEKL
QAEIARKLGY RLVDHRLELY CVPMDDDKS