| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_3315 |
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| Symbol | trmE |
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| ID | 4028860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 3692371 |
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| End bp | 3693747 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637968530 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_575358 |
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| Protein GI | 92115430 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA CGCCTCTTTA TCGACAAGAC ACCATCGCCG CGATCGCCAC GCCCCCGGGG
CGCGGCGGCG TGGGCATCAT ACGCCTCTCG GGCCCGGCCA GCCGTGACCT CGCGGAACGC
ATCCTCGGCC ACTGCCCGGC ACCACGCCAC GCCCACTACG GCCCCTTCTA CGATGCCGAC
GCGCAGGTGC TCGACGAAGG CATCGCCCTG TTCTTTCCCG GCCCTCATTC CTTTACCGGT
GAGGACGTGC TCGAGCTGCA GGGCCATGGC GGGCCGGTGA TCATGGACCT GCTGCTCGCG
CGCTGCGTCG CCCTCGGCGC GCGCCTGGCA CGCCCCGGCG AATTCTCGGA ACGCGCCTTT
CTCAACGACA AGCTCGATCT GGCCCAGGCC GAGGCGATCG CCGACTTGAT CGACGCCAGC
TCCCGAGCTG CCGCCGAAAA TGCCCTGCGT TCGCTGCAGG GCGAGTTCTC GACGCGGGTC
TCGGCACTCG TCGACAAGCT GATCGAGCTG CGGATGTTCG TCGAAGCCGC CATCGACTTT
CCCGAGGAGG AGATCGACTT TCTCGCCGAT GGCAAGGTGG CCGCGATGCT TCAGGGTGCC
CAGGAGACGC TTGGCGAGGT GCGCGCCGCC GCCGGCCAGG GGGCATTGAT GCGCGAGGGC
ATGAACGTGG TCATCGCCGG GCGTCCGAAT GCCGGCAAGT CGAGCCTGCT CAACGCCTTG
ACCGAGCGCG ACAGCGCCAT CGTCACCGAT ATCGAGGGCA CCACTCGGGA CGTGCTGCGC
GAATATATCC ACATCGACGG CATGCCGCTG CACGTCATCG ATACCGCCGG CTTGCGCGAT
ACGCCGGATG CCATCGAAAA GATCGGCGTG GCGCGTGCCT GGGAGGAAAT CGAGAAGGCC
GATCGGGTGC TGCTGCTGGT CGATGCGACG ACCACGACAC AGACCGACCC GATGCAACTC
TGGCCCGAAT TCGTCGCGCG CCTACCGCAT CCCGAGCGCC TCACCCTGGT GCGCAACAAG
ATCGACGAGA GCGGCGAAAC CGAGCAAAGC GACTTATCCA CATCCCCTCC GATCGTGCGG
CTCTCCGCCA AGACCGGTCT GGGTGTGGAT AACCTGAAGG AGCATCTCAA GGCGGTGATG
GGCTTCGACG CCACCACCGA AGGACGCTTC TCGGCCCGCC GTCGACATCT CGATGCCCTG
GATCGCGCCG GCGACGCCCT CGACAACGGC ATCGCCCAGC TACGCGGCCA TGGCGCCGGC
GAGCTGCTCG CCGAGGACCT GCGCGACGCA CAGCAGGCGC TGTCCGAGAT CACCGGCGAG
TTCACCGCCG ATGACCTGCT CGGCGAGATC TTCGGCAGTT TCTGCATCGG GAAATGA
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| Protein sequence | MTATPLYRQD TIAAIATPPG RGGVGIIRLS GPASRDLAER ILGHCPAPRH AHYGPFYDAD
AQVLDEGIAL FFPGPHSFTG EDVLELQGHG GPVIMDLLLA RCVALGARLA RPGEFSERAF
LNDKLDLAQA EAIADLIDAS SRAAAENALR SLQGEFSTRV SALVDKLIEL RMFVEAAIDF
PEEEIDFLAD GKVAAMLQGA QETLGEVRAA AGQGALMREG MNVVIAGRPN AGKSSLLNAL
TERDSAIVTD IEGTTRDVLR EYIHIDGMPL HVIDTAGLRD TPDAIEKIGV ARAWEEIEKA
DRVLLLVDAT TTTQTDPMQL WPEFVARLPH PERLTLVRNK IDESGETEQS DLSTSPPIVR
LSAKTGLGVD NLKEHLKAVM GFDATTEGRF SARRRHLDAL DRAGDALDNG IAQLRGHGAG
ELLAEDLRDA QQALSEITGE FTADDLLGEI FGSFCIGK
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