Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3258 |
Symbol | |
ID | 4029007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 3630987 |
End bp | 3633197 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637968473 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_575301 |
Protein GI | 92115373 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.875335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCGAT ATCGGCCCGA TGACGAGAGC GAGGATCCGT TTCCCATGAG TCGCACACTG TCTCCCCACT GGCTTACCTG CGCGTGTCTG GCCGGCGTGA TGTTCGTCCC CATGACGGGC TGGGCGCAAA CCGAGGGCGG AGAAACCGAT GCCGTCGATC TGTCCACCGT GACGGTCTCG GGCCAGGCCG CCACCAAGAC ACAGACGCCG ATTGTCGAAA CCCCCCAGTC CGTCTCGCGT GTCGATCGCG ACGAGATGGA TGAGCGTGAC ACCCGCACCC TCAGGGAAGC CGCGCAATAT ACGCCGGGCG TCTATACCAA CCAGGTCGGC GCCTCCAACC GCTACGACTA CCTGGTCATG CGAGGGTTCT CCGACGGCAG CTTGAGCAAT ACCTATCTCG ATGGCCTCAA GGTCATGGGC GATACCAACG GTTACAGCTC GATGGTGATC GATCCGTATT TTCTGGAGAG CGTCGAAATC GTCAAGGGAC CGGCCTCCGT ACTCTACGGG CGCTCCTCCC CCGGTGGCCT GGTGGCGTTG ACCAGCAAGC AGCCGCAGTT CGAGACGCAT CGTCAGCTGC GGTTCAGCGT CGGCAACAAC AGTCAGCGCA GCGCGGCGTT CGATCTGACC GGCCCTCTGG ACGACGAGCG GCGGGCCGCC TATCGCGTGG TGGGGTTGGC CAGCGGTGCG GATACCCAGT TCGACACGGT CGAGGAGGAG CGCTATGCCA TCGCGCCATC GGTGACCTGG GACGTCACCG ACGACACGAC CCTGTCGTTC ATGGCCTATC TGCAAAAGGA TCCGGAGGGC GGTTATCACT CCGGCGTGCC TTACGAGGGG GCGGTGGAAA GCCACAATGG ACGGAAGATC AGCAACAACT TCTTCGATGG CGAGGACGAT TACGACAAGT TCGAGCGTAC CCAGCGCATG TTCGGCTACA GCCTCGAGCA TCGCTTCAAC GATGCCTGGA CAGCGCGTCA GAAGGTCCGT TATCTGAATG CTGATGTCGA TCTGGATCAG GTCACCCAAG GTGCTGAATA CCTTTACGAT AGTGCGGGCA ACCTGATAGG GCAAAACGTC TGGGTCGATG GGGATAGCAA CGAACTCAAG CGTTACTATT ACGGTGCCCA AGAGTCGCTG GAAGCCTGGA CCATCGATAA CCAAGTAGAA GCCAATCTCG ACGGTGGCTT CATCGACCAT ACGCTGCTGG TCGGTGTGGA TTATCAGACA CGCCAGAACG ATATCGTCTA CACATCTGGC GTTTTCCCGA ATATCAATCC CTTCGATCCG CAGTACGGCG CCGATCCTGT GGGAGCGATC GCCACAGCCA GCGACGAACG TCATGAACTG ACACAGACGG GGGTTTATCT ACAGGATCAG ATGGCGTTCG ACCGCTGGCG CCTGACGCTC GGAGGCCGTT ACGACTGGGT TAATATCGAG AACACCGACT ACCTGAAAGA TAGCGAAGAC AAACTGGACG ATACCCAGTT CAGTGGTCGA GCCGGTGTGC TCTATATGTT CGATAATGGT GTCGCGCCCT ACATGAGCTA CAACACGGCC TTCACGCCGA CCAGTTTCGT CGATGCCGAG GGTGACGTGC TCGAACCGAT GGAAGGCGAG CAATGGGAGA CGGGCCTCAA GTATCAGCCC CCGGAAACCG AGGATCGCTA CAGCCTCTCG CTGTTCCGCA TCACCCAGGA AAACGTCGCC ACCAAGGAGC AGCCCACCGA CCCCTACCGC TCCATCGGCG AAATCGAGTC TCAGGGCCTG GAGCTGGAAG CCCGCAAGCA GTTGACCGAG GGATTGCGCT TGCAGGCCGC CTACAGCTAT ACCGATATCC GCTATACCAA GAGCGAAGAT CCGGACGAAG AAGGCAGTCA CGCCATTTAT GCCCCACGCC ATCAAGCCAG CCTGTGGAGC CATTATGCTT TCCAGAGCGA GGCGCTTGCG GGGCTGGATG CCGGGCTGGG GGTGCGCTAT TACGCCGATA TCCAAGCGGA TCGCGCCAAC ACCGAACAAG TGCCCGATTA CACGCTGGTC GATGCCATGC TGGGGTATGA CCTGGGGCAG ATGGGCATGT CGGGCATGCA GGTGCAACTC AATGTGGGCA ACTTGCTCGA CAAGGAATAC GTGGCCTCGT GCAACTCGCT TCAATACTGC TACTTCGGTG CGGAGCGTAA TGTGCGCGCG AGCCTGACCT ACGACTTCTA G
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Protein sequence | MGRYRPDDES EDPFPMSRTL SPHWLTCACL AGVMFVPMTG WAQTEGGETD AVDLSTVTVS GQAATKTQTP IVETPQSVSR VDRDEMDERD TRTLREAAQY TPGVYTNQVG ASNRYDYLVM RGFSDGSLSN TYLDGLKVMG DTNGYSSMVI DPYFLESVEI VKGPASVLYG RSSPGGLVAL TSKQPQFETH RQLRFSVGNN SQRSAAFDLT GPLDDERRAA YRVVGLASGA DTQFDTVEEE RYAIAPSVTW DVTDDTTLSF MAYLQKDPEG GYHSGVPYEG AVESHNGRKI SNNFFDGEDD YDKFERTQRM FGYSLEHRFN DAWTARQKVR YLNADVDLDQ VTQGAEYLYD SAGNLIGQNV WVDGDSNELK RYYYGAQESL EAWTIDNQVE ANLDGGFIDH TLLVGVDYQT RQNDIVYTSG VFPNINPFDP QYGADPVGAI ATASDERHEL TQTGVYLQDQ MAFDRWRLTL GGRYDWVNIE NTDYLKDSED KLDDTQFSGR AGVLYMFDNG VAPYMSYNTA FTPTSFVDAE GDVLEPMEGE QWETGLKYQP PETEDRYSLS LFRITQENVA TKEQPTDPYR SIGEIESQGL ELEARKQLTE GLRLQAAYSY TDIRYTKSED PDEEGSHAIY APRHQASLWS HYAFQSEALA GLDAGLGVRY YADIQADRAN TEQVPDYTLV DAMLGYDLGQ MGMSGMQVQL NVGNLLDKEY VASCNSLQYC YFGAERNVRA SLTYDF
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