Gene Csal_3219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3219 
Symbol 
ID4028553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3588494 
End bp3590632 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content66% 
IMG OID637968434 
Productpyridine nucleotide-disulphide oxidoreductase dimerisation region 
Protein accessionYP_575262 
Protein GI92115334 
COG category[C] Energy production and conversion
[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACATT ACCGCGTGGT GATTCTCGGC TTGGTCCTGG TGGCGATCGT GGCCTTCTTC 
GCGAGTGGCT TCGACGATTA CCTGACGCTC GAGTCCATCA AGTCGCTGCA AGGGCGGTTC
GATCGATGGT TCGCCGACGC GCCCTGGCTC GTCGCCGGCG GCTTCTTCCT CGTCTATGTA
CTGATCGCCG CGCTCTCGCT GCCCGGCGCC GCCTTCCTGA CGCTGCTGGG GGGCGCCCTG
TTCGGCCTGG GCTGGGGATT CTTGATCATC TCCTTTGCCA GCACGATTGG CGCCACCCTG
GCCTTTCTGG TCTCGCGGAC CCTGTTTCGG GAACTGATCG AGCGTCGTTT CGCGCGGCAG
ATCGAGACGA TCAACCGTGG CATCGAGCGC GACGGTGCGT TGTATCTGTT CAGCCTGCGC
CTGGTACCGA TCTTCCCGTT CTTCGTGGTC AATCTGGCCA TGGGCCTGAC CCGGCTGCGC
ACCTCGGTGT TCTATGTCGC CAGCCAGATC GGCATGATTC CGGGCACGCT GGTCTACGTG
AATGCCGGCC AGCAACTCGG CGAGCTGCAA TCGCTGGGTG GCGTCGTGTC GCCGTCGCTG
CTGCTTTCCT TCGCCCTGCT GGGCGTCTTC CCGCTGATCG CACGTTGGGT CGTCGACGGG
CTGCAACGCC GCAAGCGCTA TCGGGGGTAT ACCAAGCCCC GGCGCTTCGA TTACGACATC
CTGGTGATCG GCGGCGGCTC GGCGGGGCTC GTGACCAGCT ACATCGCCAG TGCAGTGCGG
GCGAAGGTCG CGCTCGTCGA ACGCGACGCC ATGGGGGGCG ACTGTCTCAA TACCGGGTGC
GTGCCTTCCA AGGCGCTGAT TCGCGCCGCG CGGGCCGCCC AGAACGTGCG CGATGCCGAG
CGGCTGGGTG TGCACGCAGG AGTGCCGCGT ATCGACTTCG GCGAGGTCAT GGGCCACGTG
CGGCGAGTCA TCGAGGAGGT GGCGCCCCAT GACAGCGAGG AACGCTATAC CGGACTGGGC
GTCGAGGTGA AACGCGGCAC GGCGCGGCTG CTGTCACCGT GGACGGTGGA TGTCGACGGC
CAGCCGCTGA CGGCTCGGCA TATCGTCATC GCCACCGGCG CCACGCCCAA GGTACCGCCG
ATTCCCGGCA TCGAGCAGGT CGACGTGCTG ACTTCCGAGA ACCTGTGGAC GCTGACCGAG
CAGCCGCGCC GCCTGGTAGT GCTGGGCGGT GGCGCGATCG GCTGCGAGCT CGGCCAGAGC
TTCGCCCGCC TGGGCAGCCA GGTCACGCTG GTCGAGGGCG CCGAGCAGCT GCTGGGGCGC
GAGGATGACG ACGTCGGCGA GCTCGTCACC GGCCTGCTCG CCGAGGAAGG CCTCGAGATC
ATGACTCGTA CCCGGGCGCT GTCGGTGACG GTCGAGAACG GCGAGAACCA GCTCCTCGTC
GAGACGGCCG ACGGTCGCCA GACGCGCATT CCCTTCGACC GCCTGCTGGT CAGCGTCGGT
CGTCAGGCCA ACGTCGAAGG GCTCGGACTG GAAGCACTGG GGATCGCCAC TCGCGACAAC
GGGACCCTGG AAGTCAATGA GCAGCTACAG ACCAAGCTGC CCAACATCTG GGCCTGCGGC
GATGTCACCG GCCCTTATCA GTTGACCCAC GCCGCCGCGC ACCAGGCCTG GCATGCCGCC
GTCAACGCCC TGTTCGGCGA GTTCAAGCGT TTCAAGGTCG ACTACCGCAT CATGCCCGCG
GTGACGTACC TGCAACCCGA AGTGGCGCGC GTGGGGCTCA ACGAGCGCGA GGCCAGGGCC
CAGGGCATCG CCTACGAGGT CACTCGCTAC GCGATGGCCG AGAGCGATCG GGCCATCGCC
GAGCGCGCCA CCACCGGCTT CGTCAAGATC CTCACCGTCC CCGGCAAGGA TCGCATCCTC
GGTGCCACCC TGGTCGGCGA AAATGCCGGT GAATGGCTGG CGGAGGTGAC GCTGGCCATG
AAGCACAACA TCGGGCTCAA CAAGTTGCTC GGCACGATTC ATCCCTATCC GACCCTCTCG
GAAGCCGTCA AAGGCACCGC CGGCGTATGG AAGAACGCCC ACAAGCCCGA GCGCCTGCTC
GGCTGGCTGG CGCGTTATTT CCGGTGGCGG CGGGGGTGA
 
Protein sequence
MKHYRVVILG LVLVAIVAFF ASGFDDYLTL ESIKSLQGRF DRWFADAPWL VAGGFFLVYV 
LIAALSLPGA AFLTLLGGAL FGLGWGFLII SFASTIGATL AFLVSRTLFR ELIERRFARQ
IETINRGIER DGALYLFSLR LVPIFPFFVV NLAMGLTRLR TSVFYVASQI GMIPGTLVYV
NAGQQLGELQ SLGGVVSPSL LLSFALLGVF PLIARWVVDG LQRRKRYRGY TKPRRFDYDI
LVIGGGSAGL VTSYIASAVR AKVALVERDA MGGDCLNTGC VPSKALIRAA RAAQNVRDAE
RLGVHAGVPR IDFGEVMGHV RRVIEEVAPH DSEERYTGLG VEVKRGTARL LSPWTVDVDG
QPLTARHIVI ATGATPKVPP IPGIEQVDVL TSENLWTLTE QPRRLVVLGG GAIGCELGQS
FARLGSQVTL VEGAEQLLGR EDDDVGELVT GLLAEEGLEI MTRTRALSVT VENGENQLLV
ETADGRQTRI PFDRLLVSVG RQANVEGLGL EALGIATRDN GTLEVNEQLQ TKLPNIWACG
DVTGPYQLTH AAAHQAWHAA VNALFGEFKR FKVDYRIMPA VTYLQPEVAR VGLNEREARA
QGIAYEVTRY AMAESDRAIA ERATTGFVKI LTVPGKDRIL GATLVGENAG EWLAEVTLAM
KHNIGLNKLL GTIHPYPTLS EAVKGTAGVW KNAHKPERLL GWLARYFRWR RG