| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_3201 |
|---|
| Symbol | |
|---|
| ID | 4028727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 3568340 |
|---|
| End bp | 3570388 |
|---|
| Gene Length | 2049 bp |
|---|
| Protein Length | 682 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637968416 |
|---|
| Product | ATP-dependent DNA helicase Rep |
|---|
| Protein accession | YP_575244 |
|---|
| Protein GI | 92115316 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCT CTCCCTCGAT TCGCCAGCGC CTCGCCAAGC TCAATCCCCG CCAGCAGGAA
GCCGCGCGGT ATATCGACGG CCCTTGCCTG GTGCTGGCCG GTGCCGGGTC CGGCAAGACC
AGCGTGATCA CCACCAAGAT CGCCTACCTG ATCCAGGAAT GCGGAATGAG CGCGCGCAAG
ATCGCGGCGG TGACCTTTAC CAACAAGGCG GCGCGCGAGA TGAAGGAGCG CGTGGGGGAG
ATGCTCCAGG GGCGCGAGGG CCACGGCCTG ACGGTGTCGA CCTTCCACAC CCTGGGGCTC
AACATCATTC GCGGCGAACT GAAGACGCTG GGCTACAAGC CGGGCTTCTC GCTGTTCGAT
CCCGAGGACG CCAAGGCACT GCTGCGCGAC TTGATGCAGA AGGAAGCGGA TACCGACGCC
GAGCAGATCA ACGCGGTGCA GGGGCAGATT TCCCAGTGGA AGAACGACCT GGTGCTGCCG
GGGCAGGCGA TCTCGCACGC CGCGGATGAA GACACGCAAT ACGCGGCGCG GGTTTATGAA
GCCTACAGCC GGCATCTCAA GGCCTACAAC GCGGTCGACT TCGACGACCT GATCCTGCTG
CCGGTGGTGC TGCTGCGCGA CAATCCCGAC GCCCTGGCCC GCTGGCGGCG CAAGATCCAG
TATATGCTGG TCGACGAGTA TCAGGACACC AACGTCAGCC AGTATCAACT GGTCAAGCTG
CTGATGGCCG AGCGCGCCAC CTTCACCGTG GTCGGCGACG ACGATCAGTC GATCTACGCC
TGGCGCGGCG CGCGCCCCGA GAACCTGGTC ACCCTGGGGG AAGACTTCCC GCGCCTGAAC
GTCATCAAGC TCGAACAGAA CTATCGCTCC ACCGGTACCA TTCTGCGCGC GGCCAATACC
CTGATCGGCA ACAATCCCCA CGTCTACGAG AAGACCCTGT GGTCGGAGAT GGGCCAGGGC
GATGCCATTC GCGTCATCGT CAATCGTCAC GAAGAGGCCG AGGCCGAGCG CGTGGCCAGC
GAGATCCTCA CCCGGCGCAT CAAGGAGCGT GCCGAATGGC GCGATTTCGC GGTCCTTTAC
CGGGGCAACT TCCAGGCGCG GTTACTGGAG CTCAAGCTTC AGCATTACCA GATTCCCTAC
AAGCTCTCCG GCGGCACGTC GTTCTTCTCG CGCAACGAGA TCAAGGATGC CATGGCGTAC
CTGCGCCTGT TGATCAACCC CGGCGACGAC AACGCCTTCC TGCGCATCGT CAACGTGCCG
CGTCGCGAGG TCGGGCCGGG AACACTGGAG AAGCTCGCCA ACTATGCCAC CGAGCGGCAG
GTGTCGCTGT TCGCCGCATG TCACGAAATC GGCCTCGAGC AGGTGCTGCC CACGCGTGCG
GTGGAGCGCC TGTCGCGCTT CACGCACTTC ATCGACGGCG TGCGCCGGCG CATGGACCAG
GGCGATGCCA TCGCGGCGAT TCGCGACATG CTGCGCGAGA TGGATTACGA GGCCTGGCTG
TTCCAGAACG CCAGCGCCCC GACCATCGCC GAGCGGCGCA TGGCCAATGT GTGGACCCTG
ATCGACCAGC TCGAGAAGTC GATGCAGCGC GACGATGACG ACGCCGACGA GACCGACGAC
GTGGAGTCCG CGATTTCGCG GCTGGTATTG CGCGATATCC TCGAGCAGCA GGCCGAGGAG
GACGACTCCG ACCGGGTGCA GCTGCTCACC ATGCATGCCT CGAAGGGGCT GGAGTTCCCG
CACGTCTACC TGATGGGGCT GGAAGAAGAA CTGCTGCCGC ACCGCAATGC GATCGAAGCC
GGCACCATCG AAGAGGAGCG GCGCCTCGCC TACGTCGGCA TCACCCGGGC GCGGCGCACC
TTGACGCTGA CCCTGGCCCG CCAGCGAAAG GCCTATGGCG AGCTGCTGGA CTGCACGCCC
AGTCGCTTTC TCGAGGAGCT TCCGCCCGAC GATCTCGAAT GGGAAGGTCG CGCCGACAAG
GAAGACCCCG AGAAGAAGCA GGCGCGCGGC AAGGATGCCA TCGCCGGACT GCGCTCGTTG
CTGGGATAA
|
|---|
| Protein sequence | MSTSPSIRQR LAKLNPRQQE AARYIDGPCL VLAGAGSGKT SVITTKIAYL IQECGMSARK
IAAVTFTNKA AREMKERVGE MLQGREGHGL TVSTFHTLGL NIIRGELKTL GYKPGFSLFD
PEDAKALLRD LMQKEADTDA EQINAVQGQI SQWKNDLVLP GQAISHAADE DTQYAARVYE
AYSRHLKAYN AVDFDDLILL PVVLLRDNPD ALARWRRKIQ YMLVDEYQDT NVSQYQLVKL
LMAERATFTV VGDDDQSIYA WRGARPENLV TLGEDFPRLN VIKLEQNYRS TGTILRAANT
LIGNNPHVYE KTLWSEMGQG DAIRVIVNRH EEAEAERVAS EILTRRIKER AEWRDFAVLY
RGNFQARLLE LKLQHYQIPY KLSGGTSFFS RNEIKDAMAY LRLLINPGDD NAFLRIVNVP
RREVGPGTLE KLANYATERQ VSLFAACHEI GLEQVLPTRA VERLSRFTHF IDGVRRRMDQ
GDAIAAIRDM LREMDYEAWL FQNASAPTIA ERRMANVWTL IDQLEKSMQR DDDDADETDD
VESAISRLVL RDILEQQAEE DDSDRVQLLT MHASKGLEFP HVYLMGLEEE LLPHRNAIEA
GTIEEERRLA YVGITRARRT LTLTLARQRK AYGELLDCTP SRFLEELPPD DLEWEGRADK
EDPEKKQARG KDAIAGLRSL LG
|
|---|
| |