Gene Csal_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3193 
Symbol 
ID4028719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3560132 
End bp3560878 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content54% 
IMG OID637968408 
ProductGntR family transcriptional regulator 
Protein accessionYP_575236 
Protein GI92115308 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAACC CGGCTTTTGC GTTCGAGCAG GCGCTGAGAA ACAAGACCAA GAAAGAGTTG 
CTGGCCGACA AGTTGGTGGA CATGGTGCGC AATCGGCTGC TCCAGGATGG TGATGAACTA
CCCAGCGAGC GTGAGATGGC GCAGCTTTTC AGCGTAAGTC GAGAGACGAT TCGTGGTGCC
GTGTCTCACT TGGCAGCCCT GGGGATGGTC AGCGTATCGC ATGGTAGTAA GACTCGGGTG
TGCGTCGATG AATCGGCACT CCAACATTAC CGGCTTATGC AGGGCGAGGA AGCAACTGGC
CCTGTCGGTG AGTCTCGCTA TGACATTGAT AGCGTTTACG AGAGCCGCCT GGTGATAGAG
TCGGCGATCG CACGGCGTGC AGCCTTGAAG ATCGACGATC ATGGCGTCGC CCAGTTGGAA
AAGATGCTCA AGACTCAGTC CGAGTGTAAT GGCGAGTACC CAATACCCTT CCAGATGTCG
GACAAGGCGT TCCACCGATT GATTTCGGAA TATGCCGATA ACGATATCTT GGTCAAATAT
GCCGATGAAC TCTACAGCTT TGACCTGTAC GTGAGGCGAC GCGTATTGCT CGAGCCTGGC
GCGGTCGAAC GCAGCTACCG TGAGCATATA TACATTGTCG AGGCCTTGAA GAGAGGCGAT
CCGGATGCTG CTGAAAGAGC CATGCTCGCC CATCTCGATA GTGTTTACCG GACGACCAAA
GAAAAAATGG CGGGTGGGTC TGGCTAA
 
Protein sequence
MDNPAFAFEQ ALRNKTKKEL LADKLVDMVR NRLLQDGDEL PSEREMAQLF SVSRETIRGA 
VSHLAALGMV SVSHGSKTRV CVDESALQHY RLMQGEEATG PVGESRYDID SVYESRLVIE
SAIARRAALK IDDHGVAQLE KMLKTQSECN GEYPIPFQMS DKAFHRLISE YADNDILVKY
ADELYSFDLY VRRRVLLEPG AVERSYREHI YIVEALKRGD PDAAERAMLA HLDSVYRTTK
EKMAGGSG