Gene Csal_3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3144 
Symbol 
ID4028611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp3500468 
End bp3501463 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content65% 
IMG OID637968358 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_575187 
Protein GI92115259 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000431686 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCATA TCGCCATGTT CAGTGCCCAG CCGTATGACC GGCGTTTCTT CGAGGCGGCG 
AATGCGCGCC ATGGCTTCAA GATCGGCTAT CACGAGGTGG CGCTCAACGC GGAGAGTGCC 
GTGCTGGCCC ATGGTGCAGA CGGCGTGTGC GCCTTCGTCA ACGATACCCT GGACGCCACC 
GTGCTGACGG CGCTCGCGAC CCAGGGCGTA GGGTTCGTGG CCATGCGTTG CGCCGGGTTC 
AACAATGTCG ACATCGAGGC CGCTGCACGC TTGGGCATCG CCGTGGTGCG CGTGCCGGCC 
TACTCGCCCG AGGCGGTGGC CGAGCATGCC CTGGCCTTGC TGCTGACGCT GAACCGCCGC 
ACGCATCGGG CCTACAATCG CGTACGCGAG GGCAACTTCA TGCTCGAGGG CTTGTTGGGC 
ATGACGCTGC ACGGCAAGAC GGTGGGGGTG ATCGGGACCG GTCGCATCGG GTTGGCCACG 
GCACGCATCT TCGCCGGTCT CGGCTGTCGC TTGCTGGGCG AGGACCGCTA CCCCAGCGAG 
GCGTTCACGA CGCTGGGTGG CGAGTATGTC TCGCGCCGGC GCCTGCTGGC GGAGAGTGAT 
GTGATCAGCT TGCATTGCCC GTTGACGGAC GATACGCGTT ATCTGATCGA TGCCGAGGCC 
CTGGCGGCGA TGAAGCCGGG GGCCCTGTTG CTCAACACCT CGCGCGGTGC TCTGATCGAT 
ACGCGCGCGG TGGTCGACGC GCTCAAGGCG CGCCGTCTGG GCGGGCTGGC CATCGATGTC 
TACGAGCAGG AAACCTCGTT GTTCTTCCGC GACCATTCCG ACGACATCAT CGACGACGAT 
GTCTTTCAGC GTCTGGTGAC CTTCCCCAAC GTGCTGATCA CCGGGCATCA GGGATTTTTC 
ACCCAGGAGG CGCTGGCCGA GATCGCCGAG GTCACGCTCG ACAATGTGGC CTGCGTGCAG 
CGTGGCGCGC CTTGTGCCAA TCGTGTCGAC GATTGA
 
Protein sequence
MTHIAMFSAQ PYDRRFFEAA NARHGFKIGY HEVALNAESA VLAHGADGVC AFVNDTLDAT 
VLTALATQGV GFVAMRCAGF NNVDIEAAAR LGIAVVRVPA YSPEAVAEHA LALLLTLNRR 
THRAYNRVRE GNFMLEGLLG MTLHGKTVGV IGTGRIGLAT ARIFAGLGCR LLGEDRYPSE 
AFTTLGGEYV SRRRLLAESD VISLHCPLTD DTRYLIDAEA LAAMKPGALL LNTSRGALID 
TRAVVDALKA RRLGGLAIDV YEQETSLFFR DHSDDIIDDD VFQRLVTFPN VLITGHQGFF 
TQEALAEIAE VTLDNVACVQ RGAPCANRVD D