Gene Csal_3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3128 
Symbol 
ID4028769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3484083 
End bp3485423 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content68% 
IMG OID637968342 
ProductNADH-quinone oxidoreductase, F subunit 
Protein accessionYP_575171 
Protein GI92115243 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID[TIGR01959] NADH-quinone oxidoreductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGA TTCTGCAAGA CCGTGACGAG CGCCGCCCCG AAACGCATCC ATTGACCTTT 
CGGCTCAACG ACGACGGCAC CCCGGTGATG CTCGAGGCCT ACCGCGAGCA GCAAGGCTAC
GCCAGCGTCG AGCGGGCCTT TCGAGACCTG ACCTCGAAGA CGCTGATCGA GGAGCTCAAG
ACCGCCAACC TGCGCGGACG CGGCGGCGGC GGCTTCTCCG CCGGGCTCAA GTGGAGCCTG
ACGGTGCAGG GCGAGGGCAT CCCGCGGGGA TACATCGTCT GCAACGCCGA TGAAATGGAG
CCCGGGACCT TCAAGGACCG CCTGCTGCTC GAGCAGCAGC CGCATCTGCT CATCGAAGGC
ATGATCCTGG CCGGTTTCGC CAACAACGCC TATCAGGGGT ACATCTTCAT GCGCGGCGAA
TACGTCGACG CCGCACGCAC GGTCCAGCGC GCGCTGGACG AGGCCCGTGC CGCCGGCTGG
CTGGGCCGAG ATGTCGCCGG CAGCGGCTGG GACTTCGACA TCGCCCTGCA CACCGGCGCC
GGCCGCTACA TCTGCGGCGA GGAAACCGCG CTGATCAACT CGCTGGAAGG CAAGCGTGCC
AACCCCCGGG CCAAGCCGCC CTTTCCGGGC CAAAGCGGGG CCTGGGGCAA GCCCACCGTG
GTCAACAACG TCGAGACGCT GTGCAACGTG CCATCCATCG TGCTGCACGG CGCGGACTGG
TATCAGGGGC TCTCGCAAGG CAAGAGCGGC GATGGCGGCA CCAAGCTCTA CGGCGTTTCC
GGCAAGGTCA AGCGGCCCGG CTTGTGGGAG CTGCCCATGG GCACGCCGGC CACCGAGCTG
ATGGAACGGG CCGGCGGCAT GCGCGAGGGG CACACGCTCA AGACCTGGCT GCCGGGCGGC
GGCAGTACCG GTTTCCTGCT GCCCGAACAC CTCGAGCTGG CGCTGGATTT CGACACCATC
GGCAACGCCG GCAGCCGTCT GGGCACGGGG CTCATCGCCG TGGTGGCCGA CGATCAGAGC
GTGGTGTCGT TGACGCGCAA CCTGGAAGAG TTCTTCGCTC GCGAATCCTG TGGCTGGTGC
ACGCCGTGCC GCGATGGCCT GCCCTGGAGC GTCAAGCTCC TGCAGGCGCT GGAAGCCGGC
GAGGGCGAGC GCGGCGATAT CGACTTGCTG GAGTCGCTGG CCGTGGATCT GGGCCCGGGG
CGGACCTTCT GCGCCCATGC GCCGGGCGCG GCGATGCCGC TGGCGTCGGC GATCCACTAT
TTCCGCGCGG AATTCGAGCG TGGCGTCACG CGCGGCCAGG GCGTCGCGCA TGCCGATCCG
ATCCCGGTGG GTAGCGTATG A
 
Protein sequence
MSRILQDRDE RRPETHPLTF RLNDDGTPVM LEAYREQQGY ASVERAFRDL TSKTLIEELK 
TANLRGRGGG GFSAGLKWSL TVQGEGIPRG YIVCNADEME PGTFKDRLLL EQQPHLLIEG
MILAGFANNA YQGYIFMRGE YVDAARTVQR ALDEARAAGW LGRDVAGSGW DFDIALHTGA
GRYICGEETA LINSLEGKRA NPRAKPPFPG QSGAWGKPTV VNNVETLCNV PSIVLHGADW
YQGLSQGKSG DGGTKLYGVS GKVKRPGLWE LPMGTPATEL MERAGGMREG HTLKTWLPGG
GSTGFLLPEH LELALDFDTI GNAGSRLGTG LIAVVADDQS VVSLTRNLEE FFARESCGWC
TPCRDGLPWS VKLLQALEAG EGERGDIDLL ESLAVDLGPG RTFCAHAPGA AMPLASAIHY
FRAEFERGVT RGQGVAHADP IPVGSV