Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_3117 |
Symbol | engB |
ID | 4028758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 3471577 |
End bp | 3472200 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637968331 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_575160 |
Protein GI | 92115232 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.307135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATG GCAGGCAGCT GAATTATCAA ACCGCGCGTT TCCTGACCAG CGCTCCGGGC CTGGCCCAGT GCCCGCCCGA CCAGGGCGCC GAAGTGGCCT TCGCCGGGCG CTCCAACGCC GGCAAGTCGA GCGCGATCAA TACGCTCACC CAGCAAAAGG CGCTGGCACG AACGTCCAAG ACGCCGGGGC GCACTCAGTT GATCAATTTC TTCACCCTGG CGAACGACGA GACCTACCGG CTGGTGGACT TGCCCGGCTA CGGTTTCGCC AAGGTGCCGG ATCAGGTCAA GCTGGAATGG CAGCGTCATC TCAGCGAGTA CCTGTACGAA CGGGCCACTC TCCGGGGCCT GATGCTGGTC ATGGACGTAC GCCACCCGCT CAGCGAGTTC GATCAGATGA TGCTGGGCTG GGCAGACGAA AAGGCCATGC CGGTTCACAT CCTGCTGACC AAGGCCGACA AGCTCAAGCC GGGTGCCGCC AAGTCGGCGC TGCTGGCCGT GCGGCGTCAG CTCGCCGACT GGGAGGACCT GGTCAGCGTG CAGCTGTTCT CGGCACTCAA GCGACAAGGC GTCGATGAAG CGCGGGCGCG CATGGATGCA TGGCTGTTGC ACCAGGCGCA GTGA
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Protein sequence | MQDGRQLNYQ TARFLTSAPG LAQCPPDQGA EVAFAGRSNA GKSSAINTLT QQKALARTSK TPGRTQLINF FTLANDETYR LVDLPGYGFA KVPDQVKLEW QRHLSEYLYE RATLRGLMLV MDVRHPLSEF DQMMLGWADE KAMPVHILLT KADKLKPGAA KSALLAVRRQ LADWEDLVSV QLFSALKRQG VDEARARMDA WLLHQAQ
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