Gene Csal_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3117 
SymbolengB 
ID4028758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3471577 
End bp3472200 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID637968331 
Productribosome biogenesis GTP-binding protein YsxC 
Protein accessionYP_575160 
Protein GI92115232 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.307135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATG GCAGGCAGCT GAATTATCAA ACCGCGCGTT TCCTGACCAG CGCTCCGGGC 
CTGGCCCAGT GCCCGCCCGA CCAGGGCGCC GAAGTGGCCT TCGCCGGGCG CTCCAACGCC
GGCAAGTCGA GCGCGATCAA TACGCTCACC CAGCAAAAGG CGCTGGCACG AACGTCCAAG
ACGCCGGGGC GCACTCAGTT GATCAATTTC TTCACCCTGG CGAACGACGA GACCTACCGG
CTGGTGGACT TGCCCGGCTA CGGTTTCGCC AAGGTGCCGG ATCAGGTCAA GCTGGAATGG
CAGCGTCATC TCAGCGAGTA CCTGTACGAA CGGGCCACTC TCCGGGGCCT GATGCTGGTC
ATGGACGTAC GCCACCCGCT CAGCGAGTTC GATCAGATGA TGCTGGGCTG GGCAGACGAA
AAGGCCATGC CGGTTCACAT CCTGCTGACC AAGGCCGACA AGCTCAAGCC GGGTGCCGCC
AAGTCGGCGC TGCTGGCCGT GCGGCGTCAG CTCGCCGACT GGGAGGACCT GGTCAGCGTG
CAGCTGTTCT CGGCACTCAA GCGACAAGGC GTCGATGAAG CGCGGGCGCG CATGGATGCA
TGGCTGTTGC ACCAGGCGCA GTGA
 
Protein sequence
MQDGRQLNYQ TARFLTSAPG LAQCPPDQGA EVAFAGRSNA GKSSAINTLT QQKALARTSK 
TPGRTQLINF FTLANDETYR LVDLPGYGFA KVPDQVKLEW QRHLSEYLYE RATLRGLMLV
MDVRHPLSEF DQMMLGWADE KAMPVHILLT KADKLKPGAA KSALLAVRRQ LADWEDLVSV
QLFSALKRQG VDEARARMDA WLLHQAQ