Gene Csal_3101 details

Gene Information

• Locus tag: Csal_3101
• Symbol: smpB
• ID: 4028742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 3453744
• End bp: 3454217
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637968315
• Product: SsrA-binding protein
• Protein accession: YP_575144
• Protein GI: 92115216
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAGA AAAAAGGCAA TCTCGGCTCT AGTACCATCG CGCAAAACAA GAAGGCTCGC 
TTCGAGTACC ACATCGACGA GACCTTCGAG GCTGGCTTGT CGCTGGCCGG ATGGGAAGTC 
AAGAGCCTGC GCGCCGGCAA GGCGCAGCTT ACCGACACGT ACATTCTGAT CAAGAACGGC 
GAGGCATGGT TGCTGGGCAG CCATATCACC CCGCTCAACA CCGTCAGCAC GCATGTCGTC 
GCGGATCCGT CGCGCACGCG CAAGCTGCTG CTGCATCGCA AGGAGATCGC CAAGATCTTC 
TCGCGCACCC AGGACAAGGG GCACACCTGC GTGCCGCTGA AGCTGTACTG GAAGAAGAAC 
CTGGTCAAGT GCGAGCTTGC CCTGGTCCGC GGCAAGAAGC TGCACGACAA GCGCGCCACG 
GAAAAGGCCC GCGACTGGAA TCGCGAAAAG GCCCGCATCA TGCGCGCGCA CTGA 

 

Protein sequence

MAKKKGNLGS STIAQNKKAR FEYHIDETFE AGLSLAGWEV KSLRAGKAQL TDTYILIKNG 
EAWLLGSHIT PLNTVSTHVV ADPSRTRKLL LHRKEIAKIF SRTQDKGHTC VPLKLYWKKN 
LVKCELALVR GKKLHDKRAT EKARDWNREK ARIMRAH