Gene Csal_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3082 
Symbol 
ID4028888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp3433999 
End bp3434631 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID637968296 
Productribosomal RNA methyltransferase RrmJ/FtsJ 
Protein accessionYP_575125 
Protein GI92115197 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACGTT CCTCGCACAC CAGCAAGAGC TCGGCCTCCT GGCTCAAGGA GCATTTCGAC 
GACCGTTACG TACAGCGCTC GTGGCAGGAC GGCTATCGCT CGCGGGCCAG TTACAAGCTG 
CTGGAACTCG ATGCCAAGGA CGCATTGCTC AAGCCGGGCA TGACCGTGAT CGATCTGGGC 
GCGGCACCGG GAGGCTGGAG TCAGATCGCT GCCGACAAGG TCGGCGACAA GGGCTGTGTC 
ATCGCCTCCG ACATCCTGGA AATGGATGCG CTGGCCGGCG TGACGTTCGT CCAGGGTGAC 
TTCACCGAGA TGGAGGTGCT GGAACAGATC CTCGTCGCTC TGGAAGGCCG TCGCGTCGAC 
CTTGTCATGT CCGATATGGC CCCCAATATG AGTGGTATGG CGGCCATCGA TCAGCCCCAG 
GCGATGTACC TCGTCGAGCT GGCGCTGGAT CTGGCGCGTC AGACTCTGTC GCCTGGCGGG 
CGCTTTCTGG CCAAGGTCTT CCAGGGAGAA GGGTTCGATG CGTATTTGAA GGAGCTGCGC 
GGCAGCTTCC GCAAGGTAGT GACTCGCAAG CCGGAGGCAT CGCGTGCCCG TTCGCGTGAA 
GTCTACTTGC TTGCGGAAGG ATTCCACGGC TGA
 
Protein sequence
MARSSHTSKS SASWLKEHFD DRYVQRSWQD GYRSRASYKL LELDAKDALL KPGMTVIDLG 
AAPGGWSQIA ADKVGDKGCV IASDILEMDA LAGVTFVQGD FTEMEVLEQI LVALEGRRVD 
LVMSDMAPNM SGMAAIDQPQ AMYLVELALD LARQTLSPGG RFLAKVFQGE GFDAYLKELR 
GSFRKVVTRK PEASRARSRE VYLLAEGFHG