Gene Csal_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3074 
Symbol 
ID4028878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3423270 
End bp3425801 
Gene Length2532 bp 
Protein Length843 aa 
Translation table11 
GC content64% 
IMG OID637968286 
Producttranslation initiation factor 2 
Protein accessionYP_575117 
Protein GI92115189 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACA TGACCGTTAA GGATTTTGCC AGCAAGGTGG GACGCGATGT GTCCCGTCTG 
CTGGAGCAGA TGCAAGAAGC GGGTCTCCCC CACAAGACCG AAGGCGATGC GGTATCCGAG
GAGGACAAGC AGCGTCTTCT CGAGCACCTG ACGCGTAGCC ACGGTGGGGA CAGCGGCGCG
ACGAAGAACC GCGTAACGTT GACGCGTAAC ACCAAGAGTC GGATTCGCAG TGGCGATGGT
CGCGGCAAGG CGATCGACGT GCAGGTTCGC AAGAAGCGTA CCTACGTCAA GCGCGAGCCG
GAACCGGCCG AGGAAAAGGC GGCCGAGGAA ACCGGTCCGC GTCAGCTGGT CGGTGACATG
GCCAGCGCCA ATCAGGCCAA GGCCGACGAG GCCGCCAAGG CGGAGCAAGC CGCTGCCGAG
CAGGCTGCCA AGGCCAAGGC CGAAGAAGAA GCCGCTGCCG CCGCAGCATC GAAAGCGGCG
GAAAGCGAGC CGGTTGCCGA GGCTCCCGGT GCGCCGCAGC CCGAGGAACC GGAAACCGCC
AGCGAGCCTT TCGTCGAGGC GCCGCCCAAG GAGCCGCGCA CGCCGAATCG TCGTGGCCAG
AACCATCAGA AGAAGGATAC CGGGCGCGGC CGCAAGCGTG ACGATGACGA AGAGCGTCGC
GAACGCGGCG AACGGCGTCG TGGCAACGCC AAGAAGACCA AGCGCTCCGA GCGTCGCGGC
AGCCGCCGTG GCGGCGGTCG CGACAATCAG CATGGCTTCC AGAAGCCGAC GCAGCCCATC
GTGCGTGAAG TCGCCATCCC CGAGTCGATC AGTGTCGCCG ATCTGGCCGA CAAGATGTCG
ATCAAGGCCA ACGAGGTCAT CAAGGCGATG TTCACCATGG GGGCGGCGGT GACCATCAAC
CAGACCATCG ATCAGGACAC GGCGGCCATT GTCGTCGAAG AAATGGGCCA CAAGCCCAAG
CTGGTCAAGG ACGATGCGCT GGAGACCGAG GTGCTCGAGG GCATCTCCTA CGAAGGCGAA
GAGATTACCC GAGCGCCGGT CGTCACTGTC ATGGGGCACG TCGACCACGG CAAGACCTCG
CTGCTCGACT ACATCCGTCG CACCAAGGTG GCGACCGGGG AAGCCGGCGG CATCACGCAG
CACATCGGTG CCTATCACGT CGAGCACGAA AGCGGTGACA TCACCTTCCT CGATACCCCG
GGTCACGCCG CATTCACGGC GATGCGTGCT CGCGGTGCGC AGGCGACCGA CGTGGTCATC
CTGGTGGTCG CGGCCGATGA CGGTGTCATG CCGCAGACGG TCGAGGCGGT CGAACACGCC
AAGGCGGCCG GTGTGCCGCT GGTCGTGGCC GTCAACAAGA TCGACAAGGA AGGCGCCGAT
CCCGATCGCG TCAAGAACGA ATTGTCGCAA TACGGCGTGA TTTCCGAAGC CTGGGGCGGC
GATACGCAGT TCGTGCATGT GTCGGCGAAG AGCGGTGAAG GCATCGACGC GCTGCTGGAA
GCCATCCTGC TGGTGTCCGA AGTGCTCGAG CTCAAGGCCG TCCCGGAAGC GCCGGCCAAG
GGCGTGGTCG TCGAGTCGCA GCTGGACAAG GGCCGTGGCC CGGTCGCGAC CGTGCTGGTG
CAGAACGGCA CGCTTAAGCG GGGCGATATC GTCCTGGCGG GATTGCACTA TGGCCGCGTA
CGCGCCCTGG TCAACGAACT CGGCAAGCGC GTGGAAGAGG TCGGCCCGGC CATGCCGGTG
GAAATCCAGG GGCTCGATGG CACGCCCGAG GCCGGTGACG AGTTCATCGT CGTCGCCGAC
GAGAAGAAGG CACGTGAAGT GGCCAACTTC CGTCAGGGCA AGTACCGCGA GGTGCGCCTG
GCACGCCAGC AGAAGGCCAA GCTGGAGAAC ATGTTCAGCC AGATGGGCCA GGACGAAGTC
GCCAAGGTCA ACATCGTGCT CAAGGCCGAT GTGCAGGGCT CCCTGGAAGC CATTCGTGGC
GCGCTGGAAG AGCTCTCCAC CGATGAAGTC AAGGTGGCGG TCGTCTCGTC CGGTGTGGGC
GGCATTACCG GCACCGACGC CAACCTGGCC GTGGCCAGTG AGGCGATCTT GGTCGGCTTC
AACGTGCGTG CCGACGTGTC CGCGCGGGAG ATCGTCGAAC GTGAAGGCCT GGACCTGCGC
TATTACAGCG TGATCTACCA GCTCATCGAC GAGGTCAAGC AGGCCATGAG CGGCATGCTG
GCGCCGGAGT GGAAGGAAGA GATCGTCGGT GTGGCCGAAG TGCGCGACGT GTTCAAGGCG
CCCAAGATCG GTGCCGTGGC AGGCTGCATG GTCGTCGAGG GTACCGTCTA TCGTCACAAG
CGTATTCGTG TGCTGCGCGA GAACGTGGTC ATCTACGAAG GCGAGCTCGA GTCCCTGCGT
CGTTACAAGG ACGACATTGG CGAGGTCCGC AGCGGTATGG AGTGCGGTAT CGGCGTCAAG
AACTACAACG ACGTTCAGGT CGGCGACAAG ATCGAGGTCT TCGATCAGGT CAAGGTCGAG
CGTAGCCTGT AA
 
Protein sequence
MSDMTVKDFA SKVGRDVSRL LEQMQEAGLP HKTEGDAVSE EDKQRLLEHL TRSHGGDSGA 
TKNRVTLTRN TKSRIRSGDG RGKAIDVQVR KKRTYVKREP EPAEEKAAEE TGPRQLVGDM
ASANQAKADE AAKAEQAAAE QAAKAKAEEE AAAAAASKAA ESEPVAEAPG APQPEEPETA
SEPFVEAPPK EPRTPNRRGQ NHQKKDTGRG RKRDDDEERR ERGERRRGNA KKTKRSERRG
SRRGGGRDNQ HGFQKPTQPI VREVAIPESI SVADLADKMS IKANEVIKAM FTMGAAVTIN
QTIDQDTAAI VVEEMGHKPK LVKDDALETE VLEGISYEGE EITRAPVVTV MGHVDHGKTS
LLDYIRRTKV ATGEAGGITQ HIGAYHVEHE SGDITFLDTP GHAAFTAMRA RGAQATDVVI
LVVAADDGVM PQTVEAVEHA KAAGVPLVVA VNKIDKEGAD PDRVKNELSQ YGVISEAWGG
DTQFVHVSAK SGEGIDALLE AILLVSEVLE LKAVPEAPAK GVVVESQLDK GRGPVATVLV
QNGTLKRGDI VLAGLHYGRV RALVNELGKR VEEVGPAMPV EIQGLDGTPE AGDEFIVVAD
EKKAREVANF RQGKYREVRL ARQQKAKLEN MFSQMGQDEV AKVNIVLKAD VQGSLEAIRG
ALEELSTDEV KVAVVSSGVG GITGTDANLA VASEAILVGF NVRADVSARE IVEREGLDLR
YYSVIYQLID EVKQAMSGML APEWKEEIVG VAEVRDVFKA PKIGAVAGCM VVEGTVYRHK
RIRVLRENVV IYEGELESLR RYKDDIGEVR SGMECGIGVK NYNDVQVGDK IEVFDQVKVE
RSL