| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_3033 |
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| Symbol | |
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| ID | 4028024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 3378442 |
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| End bp | 3380775 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637968240 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_575076 |
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| Protein GI | 92115148 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACCGA GTAGATTTCC TGCGCTTTTC TCCCAGCCGT CGGGAGAATC CCAGAACCTG
CTGCATGTGC AGGTCGCGTT GAGGGCCCGC GCAGATCAAC GATTGCTGGT GCGGACGCTG
CGAGACGCCG GGTTAACGCC GGAAAGCGTG ACCCTGCCAG ATGGCAAGGC CGATCTGGTC
ATCGTGGACG CCTGGGCGTG GGAGCACTCC CGCGAGCGAC TACGAAGCGT TCGTGAAAAC
GCCTACCCGC TGGTGTTTCC GATCCTGGCA ATTGCCGGCA AGGAAGCAGC GTCCGCCGCC
TGGGCCTATC GCGAACTCGG CGCCGACATC GACGACCTGG TGGAGCTGCC CACCTCCAGG
GCCGTGCTGC TGTCCCGTGT GGGCAATTTG CTGCGCCTGC GCCGACTCTC TCTGACACAG
GCCGACCACC ACCGATCGAC CCAGCAAAAG CTGAATGCCG TCAATCGCGC GCTGCAGACC
TTGCATGCCT GCAACGAAAT GATGGTGCGT GAATCCACGG AAGAGGGGCT GTTGCAATCC
GTGTGCGAGG TCATCGCGCA ATTTGAAGGA TACGCACTGG CCTGGGTCGG ATTTGCCGAC
GACAGCACGC AGAAGAAGGT GGCCAAGTGC TACATCGCCG GAGACGCCGC CGATTACGCG
CGAGCCATCG ACGTGAGTGC CGATGGCTCG CCACTGGGAC AGGGCCCCAT CGGGAAAGCC
ATTGCGACCG GGAGCCCCCA GATCGTTTCC GACATGGCTT CCGAACCGCG CATGGCGCCC
TGGAGAGAGC AGATCACCGC CTGGGGGCTG GGCGCGGAGA TCGCGCTACC CTTGAATGTC
TCGGTGGGAT CGAGCGGTGT GCTGGCGGTG TATTCGCAAC AGTCGGGAGA CTTCGCCAGC
GATGAACGGG CGCTGCTCGA GCGCCTCGCC GAAAACCTCG CCTTTGGCCT GGACCGCCTG
CGACTGCAGA ACGTGCGCAA GGCACAGAAC CAGGAAATAA AACGACTCGC CTATGAAGAC
CCGGTGACCG GCATGGCGAA CCGCCGCTCC TTGCTGGCCC GTCTGCATGA ACTGGTGGGA
CGAGCCAACC ATGAGCAGGC CGCGGCGATA TTGTTCATCG ATCTCGACGA CTTCAAGCTG
GTGAACGATG CCCTCGGGCA CAAGGTCGGC GATCGCGTCC TCCAGAACGT CGCCTGGCGC
ATCAACAATA CGCTGCGGGA AGGCGACCTG GTGGCACGCC AGGGGGGTGA CGAATTCATC
GTCGTCATGA TGGACGATCC ACGATATTCG CCGTCAGTGG CAGAAGACGT CCGACAACGC
CTGGCCCGAG GCGCCGAAGA GATGGCGCGG CGTATCAGCC GAACGCTGCG TCAGCCTTTC
GAAATCAACG GATACGCTCA TCGGCTCGGT GCCAGCATCG GCGTCAGCCT CTTTCCCTAT
CTCAGCGACG ACCCCGAGAC CGTCATCGAT CAGGCCGACA TGGCGATGTA TGCCGCCAAA
CGCTCGGGTC AGCACACGGT CTTCTTCTCG CCGGAGCTCG CCACCGGCCG CCAGCAACGC
CTGTCGTTGG AAACCAAGCT GAATCATGCG CTGGCAGCAG GCGAGCTGCA ATTGCATTAC
CAACCCGTCT GGGAGCTCGA CAGCGGCCGA ATCGTAGCCG TGGAAGCGCT TCTGCGCTGG
CAGGATGCCG AGGGCGAGAT GATTTCCCCG GCGACCTTCA TTCCCGTTGC CGAAGAAATC
GGCTTGATGG GCGCCCTCAG CAAATGGGTC ATCGACGAGG CGGCTCGGCA GCTCGAATCC
TGGCGCGAAA CCGGGCTCGA ACTCACCATG GGCGTCAACT TGTCGGTATC GCAGCTTCAA
GGGGCTGACG CGGCGCGCAA GATCCATGAT CAGGTGGTGT CTTCCGGCAG CGACCCGCAA
TGGTGGCTAC TCGAGTTGAC CGAAGAAGCC GTCATGCAGT CCCCCGAGGC CGTCATGGAG
GCGATGCGCC TGCTCGACGG TGCCGGCTTC CGGCTGGCCC TGGATGACTT CGGGAGGGGT
TACTCATCGC TTGCACGATT GCAGGCCATG CCACTGCACA CCCTGAAAAT CGACAAGCTG
TTCGTCGACA GCCTGCGGGA AGATACGCCC GATGACCGGG TCGTGCGCAC AGTGGTCGAA
CTGGCCCGGC AATTTTCCCT GCGTGTCGTG GCCGAAGGGA TCGAGCATGC GGAACAGGCC
CGACAATTGA CCGCGATGGG ATGCAGCTTC GGACAAGGGT TCTGGGTCAG CCCCGCCGTG
GCCGCCAGCG AGATCCCCAG CTTGATACGC CGCGCCGCGC CACCCGCGCT CTGA
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| Protein sequence | MPPSRFPALF SQPSGESQNL LHVQVALRAR ADQRLLVRTL RDAGLTPESV TLPDGKADLV
IVDAWAWEHS RERLRSVREN AYPLVFPILA IAGKEAASAA WAYRELGADI DDLVELPTSR
AVLLSRVGNL LRLRRLSLTQ ADHHRSTQQK LNAVNRALQT LHACNEMMVR ESTEEGLLQS
VCEVIAQFEG YALAWVGFAD DSTQKKVAKC YIAGDAADYA RAIDVSADGS PLGQGPIGKA
IATGSPQIVS DMASEPRMAP WREQITAWGL GAEIALPLNV SVGSSGVLAV YSQQSGDFAS
DERALLERLA ENLAFGLDRL RLQNVRKAQN QEIKRLAYED PVTGMANRRS LLARLHELVG
RANHEQAAAI LFIDLDDFKL VNDALGHKVG DRVLQNVAWR INNTLREGDL VARQGGDEFI
VVMMDDPRYS PSVAEDVRQR LARGAEEMAR RISRTLRQPF EINGYAHRLG ASIGVSLFPY
LSDDPETVID QADMAMYAAK RSGQHTVFFS PELATGRQQR LSLETKLNHA LAAGELQLHY
QPVWELDSGR IVAVEALLRW QDAEGEMISP ATFIPVAEEI GLMGALSKWV IDEAARQLES
WRETGLELTM GVNLSVSQLQ GADAARKIHD QVVSSGSDPQ WWLLELTEEA VMQSPEAVME
AMRLLDGAGF RLALDDFGRG YSSLARLQAM PLHTLKIDKL FVDSLREDTP DDRVVRTVVE
LARQFSLRVV AEGIEHAEQA RQLTAMGCSF GQGFWVSPAV AASEIPSLIR RAAPPAL
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