Gene Csal_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2960 
Symbol 
ID4027498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3297459 
End bp3298061 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content62% 
IMG OID637968167 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_575004 
Protein GI92115076 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.825188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTAT TGGTTGGACG TCAGGTACCC GATTTTGAAG CGGCAGCGGT TCTGGGCGAT 
GGCACCATCG TCGAAGACTT CAAGCTGTCC GAAACCAACG GCAAGCTGCG TGTCGTCTTT
TTCTGGCCGC TGGACTTCAC CTTTGTCTGC CCGTCAGAGA TCATCGCCCA CGACAACCGT
CTGGCGCAGT TCCGCGAGCT GGGCGTCGAG GTGATCGGGG TGTCCATCGA CTCTCAGTTC
ACTCACCACG CATGGCGCAA GACGCCCCAC GACAAGGGCG GCATCGGTGA AGTCGGCTTC
CCGATCGTGG CCGACGTCAA GCACGAGATC ACGCAGGCCT TCGGCATCGA GCATCCGGAA
GCCGGCGTCG CGCTGCGCGC GTCCTTCCTG ATCGACGAAG ACGGCGTCGT CCAGCACCAG
GTCGTCAACA ACCTGCCGCT GGGCCGCAAC GTCGACGAGA TGCTGCGCAT GGTCAAGGCC
CTCAAGTTCC ACCAGAAGAA CGGCGAAGTG TGCCCGGCAG GCTGGGACGA AGGCCAGGAA
GGCATGAAGG ACACCGCCGA AGGCGTCGCC AAGTACCTGG GTTCTCACTC CGACGAACTC
TAA
 
Protein sequence
MSVLVGRQVP DFEAAAVLGD GTIVEDFKLS ETNGKLRVVF FWPLDFTFVC PSEIIAHDNR 
LAQFRELGVE VIGVSIDSQF THHAWRKTPH DKGGIGEVGF PIVADVKHEI TQAFGIEHPE
AGVALRASFL IDEDGVVQHQ VVNNLPLGRN VDEMLRMVKA LKFHQKNGEV CPAGWDEGQE
GMKDTAEGVA KYLGSHSDEL