| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2937 |
|---|
| Symbol | |
|---|
| ID | 4028332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 3274800 |
|---|
| End bp | 3276155 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637968144 |
|---|
| Product | MATE efflux family protein |
|---|
| Protein accession | YP_574981 |
|---|
| Protein GI | 92115053 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTTCAT CACGCCCCGC GACACGCATC TGGCCGCTCG CCTGGCCGAT CATCCTTTCC
AACATCACCG TCCCGCTGCT GGGACTGGTG GACACCGCGG TGGTCGGCCA CCTGCCGGAC
TCCCGCTACA TGGCCGCCGT GACCCTGGGG GCCACCCTGT TCAGCTTTCT GTACTGGGGC
TTCGGGTTTC TGCGCATGGG CACCACCGGC CTGACCTCCC AGGCCGTGGG CCGCGAGGAC
GACAGCGACA TCCGCAACCT GCTGGGTCAG GCGCTGTTGC TGGCACTCGG CATCGGCGTG
CTGCTGATCC TGCTCGCCGA ACCGCTGATC GACTTCGGTC TCTACCTGCT CGACGGCAGC
CCGGCGGCCA TGGCCCTGGC CGACGATTAC GCCCATATTC GCATTCTGTC GGCCCCGGCG
GTGATGGCGA ATTACGCGAT TCTCGGCTGG TTTCTGGGCC AGCAGAACTC GCGGGTCACG
CTGGCGATCA TGGTGTTGAC CAACAGCGTC AACATCGTCC TCGACCTGGT GTTCGTGGTC
GGGCTGGGCA TGACCAGCGA CGGCGTGGCC TGGGCCACCG TCATCGCCGA CTATACCGCC
CTGGGCGCGG GACTGTGGCT CGTGGCACGC CAGCTGGGAC GCCTGCAGGG ACGCTTCCTG
CGTCGGCGCC TGCTGCGATT CGCCGCCTAC TCCGAGCTGT TCCAGGTCAA TCGGCACCTG
TTCGTGCGCA CGCTGGGGCT GCTGTTCGCC ATGGCCTTCT TCACCGCTCA GGGCGCCGAC
CAGGGCGACA CGGTGCTCGC CGCCAACGCG GTACTGATGC AGTTCATCAT GATCACCTCC
TACGCGCTGG ACGGCTTCGC CCATGCCGCC GAAGCCTTGA CCGGACGCGC CGTGGGGCGT
CGCGACTGGC CGCTTTTCTC GAGCGCGGTG CGCGCGGCCG CGCGTTTCTC GCTGGTCACC
GCCGGGGTCG CCATGGCCGC GTTCCTGTTC GGCGGCCATG CCCTGATCGC CCTGCTCACC
GACCTGCCCG ACGTGCGAGC CTCGGCGGCC GACTACCTGC CCTGGATGGT CGTCATGCCG
GCCATCGCGG TATGGAGCTA TCTGCTCGAC GGCGTCTTCA TCGGCGCCAC CGCAACCCGT
GAAATGCGCG ACACCATCCT GCTGGCACTC GCCGTCTACC TGCCGGTGTG GTGGCTCGCG
CAACCGCTGG GCAACCACGG CCTGTGGCTC GCCTTCACGG CCTTCACCCT GGTGCGCTCG
GCAAGTCTCG CCGCCGTCTA CCTGCACTAT CGGCGCACGC GCTGGACAAG CGCCGCGACG
CCCGCCTGCG ACCAAGGGAT ACAGGACCAA GGTTGA
|
|---|
| Protein sequence | MSSSRPATRI WPLAWPIILS NITVPLLGLV DTAVVGHLPD SRYMAAVTLG ATLFSFLYWG
FGFLRMGTTG LTSQAVGRED DSDIRNLLGQ ALLLALGIGV LLILLAEPLI DFGLYLLDGS
PAAMALADDY AHIRILSAPA VMANYAILGW FLGQQNSRVT LAIMVLTNSV NIVLDLVFVV
GLGMTSDGVA WATVIADYTA LGAGLWLVAR QLGRLQGRFL RRRLLRFAAY SELFQVNRHL
FVRTLGLLFA MAFFTAQGAD QGDTVLAANA VLMQFIMITS YALDGFAHAA EALTGRAVGR
RDWPLFSSAV RAAARFSLVT AGVAMAAFLF GGHALIALLT DLPDVRASAA DYLPWMVVMP
AIAVWSYLLD GVFIGATATR EMRDTILLAL AVYLPVWWLA QPLGNHGLWL AFTAFTLVRS
ASLAAVYLHY RRTRWTSAAT PACDQGIQDQ G
|
|---|
| |