Gene Csal_2868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2868 
Symbol 
ID4028670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3199297 
End bp3200274 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content72% 
IMG OID637968076 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_574913 
Protein GI92114985 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCACT CCCTGCGCGT CGTCTTCGCC GGCACGCCCG ATTTCGCCGC CGCGAGTCTC 
TTGGCGCTGC TCGACAGCCG TCACCAGGTG GTCGCCGCGT ACACCCAGCC GGACCGACCG
GCCGGTCGCG GGCGCAAACT CACGCCCAGC CCGGTCAAGG CGCTGGCGCA GGAGCACGGC
CTGCCCGTCC ATCAGCCCAC CAGCCTCAAG GATACCGACG CCCAGCAGAC GCTCGCCGCG
CTCGAGGCCG ATGTCCTGGT GGTCGTCGCC TATGGCTTGA TACTGCCGCA GGCCGTTCTC
GATATCCCGC GCCTGGGATG CCTCAACGTC CATGCGTCAC TGCTGCCACG CTGGCGCGGT
GCGGCGCCGA TCCAGCGTGC CATCGAGGCC GGGGACACAC GCAGCGGCGT GACCATCATG
CAGATGGACG CCGGGCTCGA CACCGGCGCC ATGCTGCTGG TGCGCGAGAC GCCGATCACG
GCGACCACCA CTGGTGGCGA GCTGCACGAC CGCCTCGCCC CGCTCGGTGG CGAGGCCATC
GTCGAGGCGC TCGACGCCCT GGCGACGGAC GGCCTGACGG CGACGCCCCA GCCGAGCGAA
GGCGTCACCT ATGCCGCCAA GCTCAGCAAG GCCGAGGCCG AGCTCGACTT CACGCGGCCG
GCCCACGAGC TGGCCGCCCG CGTGCGTGCC TTCAACCCCT GGCCGGTGGC CTGGACGCGC
CTGGCTGGCG AGCCGCTGCG GCTATGGCTG GCGGAGGCCG AAGCAGAGGC CGAGCGCCCC
GGCGTCGCGC CCGGCACCCT GCTGCAGAGC GCCCCGGATG CCCTGCGCAT CGCCTGCGGT
CACGACGGCA CCCAGGTGGT GCGCATTACC CGTGCCCAGC TGCCCGGCGG CAAGCCGCTG
GCCGTGCGCG ACCTGCTCAA CGCACGTGGC GAGCGCTTTC CCGAGGGGCT TCGTCTGGGA
CAGGAGGATC GCGCGTGA
 
Protein sequence
MSHSLRVVFA GTPDFAAASL LALLDSRHQV VAAYTQPDRP AGRGRKLTPS PVKALAQEHG 
LPVHQPTSLK DTDAQQTLAA LEADVLVVVA YGLILPQAVL DIPRLGCLNV HASLLPRWRG
AAPIQRAIEA GDTRSGVTIM QMDAGLDTGA MLLVRETPIT ATTTGGELHD RLAPLGGEAI
VEALDALATD GLTATPQPSE GVTYAAKLSK AEAELDFTRP AHELAARVRA FNPWPVAWTR
LAGEPLRLWL AEAEAEAERP GVAPGTLLQS APDALRIACG HDGTQVVRIT RAQLPGGKPL
AVRDLLNARG ERFPEGLRLG QEDRA