Gene Csal_2854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2854 
SymbolispG 
ID4028656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp3184555 
End bp3185670 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content65% 
IMG OID637968062 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_574899 
Protein GI92114971 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATGC AATCTCCGAT CCAACGGCGC AAGTCGCGCC AGATTCATGT CGGGCACGTC 
CCCGTCGGTG GGGACGCCCC CATCGCCGTG CAAAGCATGA CCAATACCGA CACGCTGGAT 
GTCGACGCCA CCGTCGCGCA GATTCGTCAG CTCGAGGCAG CGGGCGCGGA CATCGTGCGC 
GTCTCGGTGC CCACCATGGA TGCCGCCGAG GCCTTCGGCC AGATCAAGCG CCAGGTCTCG 
GTGCCCCTGG TGGCCGACAT CCACTTCGAT TACAAGATCG CCCTGCGCGT GGCCGAGCTG 
GGCGTCGACT GTCTGCGCAT CAACCCCGGC AACATCGGCC GCGAGGACCG CGTGCGTGCA 
GTGGTCGATG CCGCACGGCA TCACGGCATT CCCATTCGCA TCGGCGTCAA CGCCGGGTCG 
CTGGAAAAGG ACCTGCAGAA GAAATACGGT GAACCCACGC CGGAGGCGCT GGTCGAATCC 
GCCATGCGCC ATATCGAGCA CCTCGATCGC CTCGACTTCC AGGACTTCAA GGTCAGCGTC 
AAGGCATCGG ACGTGTTCAT GGCGGTGGCC GCCTATCGCC AGCTCGCCCA GCGCATCGAT 
CAGCCGCTGC ACCTCGGCAT CACCGAGGCC GGCGGCCTGC GGTCGGGCAC GGTCAAATCC 
TCGATCGGCC TGGGGCTGCT GCTGATGGAA GGCATCGGCG ACACCATCCG CGTCTCGCTG 
GCCGCCGACC CGGTCGAGGA GATCAAGGTC GGCTATGACA TGCTCAAGAG CCTGCGCCTG 
CGCAGCAAGG GCATCAACTT CATCGCCTGC CCGAGTTGCT CGCGGCAGAA TTTCGACGTC 
ATCGGCACCA TGAACGCCCT CGAGGAACGC CTCGACGACA TCATGACGCC CCTCGACGTC 
TCGGTCATCG GCTGCGTGGT CAACGGGCCC GGCGAAGCCA AGGAAAGCGA CATCGGTCTG 
ACCGGCGGCG ATCCGGCCAA CCTCGTCTAC ATCGACGGCA AGCCGGCCAG CAAGCTGCGC 
AACGACCACC TGGTCGACGA CCTGGAAGCA CTGATCCGCG ACAAGGTCCG CGAAAAAGAA 
GCCCGCGAAC GCGATACCAT CGCGCGCGAG GCATGA
 
Protein sequence
MHMQSPIQRR KSRQIHVGHV PVGGDAPIAV QSMTNTDTLD VDATVAQIRQ LEAAGADIVR 
VSVPTMDAAE AFGQIKRQVS VPLVADIHFD YKIALRVAEL GVDCLRINPG NIGREDRVRA 
VVDAARHHGI PIRIGVNAGS LEKDLQKKYG EPTPEALVES AMRHIEHLDR LDFQDFKVSV 
KASDVFMAVA AYRQLAQRID QPLHLGITEA GGLRSGTVKS SIGLGLLLME GIGDTIRVSL 
AADPVEEIKV GYDMLKSLRL RSKGINFIAC PSCSRQNFDV IGTMNALEER LDDIMTPLDV 
SVIGCVVNGP GEAKESDIGL TGGDPANLVY IDGKPASKLR NDHLVDDLEA LIRDKVREKE 
ARERDTIARE A