Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2841 |
Symbol | |
ID | 4028643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 3172496 |
End bp | 3173830 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637968049 |
Product | permease for cytosine/purines, uracil, thiamine, allantoin |
Protein accession | YP_574886 |
Protein GI | 92114958 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1457] Purine-cytosine permease and related proteins |
TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family [TIGR02358] probable hydroxymethylpyrimidine transporter CytX |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.810699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTCT TCCATCGTCT GCTCGGTCAG GACACCCTCG ACGACCACCA GCACAAGAGC CTCGGGGCGT TCGGCACTGT CGCCCTGTGG CTCGGCGCCA ACGTCGTGGT CACCACCATC CTCACCGGCA TGCTCCTGGT GCCCGATCTG CCCTTCACGA CCGCCATGGG CAGCGTGCTG ATCGGCTCGT TGATCGGCGC CATCCCGCTC CTGCTGGTCG GGCTGATGGG CCAGCGCACC GGCCTGCCTT CCATGGCGTT GACCCGGCGC GCGTATGGCC CGCTCGGCAG CCGGCTGATC TCGCTGGTCA ACATGGGGGT ACTGATCGCC TGGAGCTGGA TCCAGGCCCT GCTCGCCGGC ATGAGTCTCG ACTACGCCAT CCAGGCGACC ACCGGCTACT CCAACCTGCC CTTGATGACC ATCCTCTGCG AGACCGTGGT GGTCCTCATC GTGCTGCGTG GCCACCTGGG CATCGAGCGG GTCGAACGCT GGGCGGCGAT GGCCATGGTG GCGCTGGCCG CCGTGGTGCT CTACCAGCTG AACCTCCACT ACGATGTCTC GACCCTGCTG GACATGCCGG TCGAGGCCCG TAACGGCATC ACCCTGGGCA TCGCCTTCGA CATCGTCATC GCCACCGCCT TCTCCTGGAT CTCGTCCTCG GCGGATTACA ATCGCAACTG CAAGAGCGGC GCCATCGCCG TCTGGGGCAC CTACCTTGGC TACGTGATGG CCGCCATGAT CGCCATGGGC CTGGGTGCCG CCGTTTCCGG GCTGTCGGTC ATGAACGGCA TGGAGCAGAC CTACGACCCG ACCCGGCTGC TCTCCGGTTT CGGCTTCGGC CTGCCCGCGG CCCTGGTCAT CTTCTTCTCC GTGATGACCA CCAATGTCAT GGCCGTCTAC AGCGCCACCC TGTCCTGCAT GAACGTGTCG CCCGGCATGG CCTTCTGGAA ACCGGCGCTG ATCATCGGGA TCGTGACCGT CTTCGGCGCC CTGATTCCCG GCATCCTGGA CCAGTTCCAG AACTTTCTGC TATTGATAGG CGCGCTGTTC ATCCCGGCCT TCTCGGTGAT CATCGTCGAT TACTACCTGG TCGGTCGCGA GGGTTACAGC CCCGAACTGC TCAAGGCGCG TCACCAGCTG GGACGCCCCA CCGCGCCGGT GGCCATCGGT GCCTACGTGA TCGGCGCCGG GCTAGCCGCC TACTGGTCGC TGGTCGCGCC GCTGGCCTTC GGCGCCTCGC TGCCGGTCTT CATCATCACC GGCGGCCTCT ACTGGCTCGG CGCCATGCTG TTGACAAAGT CCCGCGCCAA CGCTTCACAG ACCGCAGGAG AGTGA
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Protein sequence | MAFFHRLLGQ DTLDDHQHKS LGAFGTVALW LGANVVVTTI LTGMLLVPDL PFTTAMGSVL IGSLIGAIPL LLVGLMGQRT GLPSMALTRR AYGPLGSRLI SLVNMGVLIA WSWIQALLAG MSLDYAIQAT TGYSNLPLMT ILCETVVVLI VLRGHLGIER VERWAAMAMV ALAAVVLYQL NLHYDVSTLL DMPVEARNGI TLGIAFDIVI ATAFSWISSS ADYNRNCKSG AIAVWGTYLG YVMAAMIAMG LGAAVSGLSV MNGMEQTYDP TRLLSGFGFG LPAALVIFFS VMTTNVMAVY SATLSCMNVS PGMAFWKPAL IIGIVTVFGA LIPGILDQFQ NFLLLIGALF IPAFSVIIVD YYLVGREGYS PELLKARHQL GRPTAPVAIG AYVIGAGLAA YWSLVAPLAF GASLPVFIIT GGLYWLGAML LTKSRANASQ TAGE
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