Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2816 |
Symbol | |
ID | 4028501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 3145045 |
End bp | 3145929 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637968023 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_574861 |
Protein GI | 92114933 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.303791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCACAG GCAGCATCGT CGCCTTGGCG ACACCGATGA AGGCCAGTGG CGAGATCGAC TGGGAGGCGC TGCGCCGCCT GGTGGGCTTC CATCTCGACA ACGGCACCGA TGCCATCGTC GCGGCGGGAA CCACCGGCGA GCCGACCACC ATGTCCTTCG CCGAACACTT CGACGTCATC CGCTGCGTCG TCGAGGAAGT CGCCGGGCGC ATTCCGGTAA TTGCCGGCAC CGGCGCCAAC GCGACCTCGG AGGCCGTCGA GCTGGCGCGC TATGCACGCG AGGTGGGCGC GGACCTGTGT CTTTCCGTCG CCCCGTACTA CAACAAGCCC ACGCAGGAAG GGCTCTACCA GCATTTCAAG GCCGTTGCCG AGGGCGGCGG CTTGCCCGTC ATCCTGTACA ACGTGCCGGG TCGCACGTGC TCGGATATCT ACAACGAGAC CGTGTTCCGG CTCGCCGAGC TCGAGAACAT CGTGGGGCTC AAGGATGCCA CCGGCAATCT GGAGCGCGCC GAGGAGCTGG TCGATCGCCT GAAAGGCTCC GACTTCGCCC TGTATTCCGG TGACGATCCC ACGGCGTGCG ATTTCATGCT GATGGGCGGC CATGGCGACA TTTCGGTATG TGCCAACGTC GCGCCGCGTG CCATGCACGA GCTGTGCGAG GCCGCCGTGG CCGGAGACGA CGAGCGCGCG CATCAGATCA ACACCCGCCT GATGCCGTTG CATACCGCGC TTGGCGTCGA GGCCAACCCG ATCCCCGTGA AGTGGGCGCT GCATCGCATG GGGCTGGCCG AGCAGGGCAT TCGTCTGCCG ATGACCTGGC TTTCCGACAA GTATCATTCC ACGGTGAGCG AAGCCCTGCA GCTCGCCGGC GTGACCGAAG GCTGA
|
Protein sequence | MITGSIVALA TPMKASGEID WEALRRLVGF HLDNGTDAIV AAGTTGEPTT MSFAEHFDVI RCVVEEVAGR IPVIAGTGAN ATSEAVELAR YAREVGADLC LSVAPYYNKP TQEGLYQHFK AVAEGGGLPV ILYNVPGRTC SDIYNETVFR LAELENIVGL KDATGNLERA EELVDRLKGS DFALYSGDDP TACDFMLMGG HGDISVCANV APRAMHELCE AAVAGDDERA HQINTRLMPL HTALGVEANP IPVKWALHRM GLAEQGIRLP MTWLSDKYHS TVSEALQLAG VTEG
|
| |