Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2630 |
Symbol | |
ID | 4028158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 2942066 |
End bp | 2943535 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637967838 |
Product | Type I secretion outer membrane protein, TolC |
Protein accession | YP_574676 |
Protein GI | 92114748 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTCTC GAGAGCCGTC ATCGCCGAAA TCTCGGCTGC GTCTGTTACC GATGCTGATC GCCGCCGCCG CGGCCGCCCC GGTGCAGGCC GCCGACCTGT GGACCATCAC GCAGGACGCC CTGCAGAACA ACGCTACCCT GGGGGCGTCG CTGTCGACCT TTCAGAGCGT CGAGGCCGGA CGTGACGTGG CGCGGGGCAG CCTGCTGCCG CAGATCGACG CGACCGCCCA GGTTGCACAC AACAACAGCC TGGAAAGCCA GAGCAGTTCC CTCAGCCAAG GCACGGGCGG TACGACTTCG GGGGGCGAAA GCAGCTACAA CTCGACGAGC GCGGGCCTCG AGTTGACCCA GGCGCTGTAC GACGCCACGA GCTGGGCCGC GCTGGAGATC GCCAAGCGCG AGACGGACCA GCAAGCGCTG TTGCTGCAGG CCGATCGTCA GCAGTTGCTC TATGATGTCG CCTCGGCATA TTTCGAGATC CTGCGCGCGC ATGAAGTGCT GGAAGCGCGC ATTTCGCAGG AAAAGGCTAT TCAGCGTCAG CTCGATCAGG CTCAGGAACA GTTCGACGTC GGCCTGGTGG CGGTGACCGA TGTCAACGAG GCGCAGGCCT CCTATGACCT GGCAAGGGCG CAGCGCATCT CGGCCGAGAA CGACCTGCAG GTCAGCTTCG AAGCCCTGGA GCGCCTGACC GGGAAGCGCT ACGACAGCAT CGATGCCCTG TCGGACGATC TTCCCATCGA GTCCCCCGAG CCGGCAGGGC GTGACAACTG GATTCAGATG GCCATCGCCA ACAATCCCAA CGTCCAGGCA GCCCAGGCAG CGGTGAGCGT CTCGCGCGCC GAGGTCGACC AGGCGGAGGC GGGGCACAAG CCGACGCTCT CGGCGTTCGC CAACTACAAC TACACGGACA GCGATCAGGA TTACCTGGAC GGGCATAACG AGGACACCCA GGTCGGCCTG CAGGCCACGC TGCCGATCTA CAGCGGCGGC ACGACCAGCG CACAGGTGCG TCAGCAGACC TACTCGCTGG AGGCCACGCA ATACGATTTC GAGGCCCAGC GCCGGGATAC CACCCAGCAG GTGCGCTCGT TGTTCACCCA GGTCATGAAC GACGTCGAAA GCGTCGACGC CCAGCGTCAG GCGATCGTCT CCAACCGTAG CGCGCTGGAA GCGACCCGTT CCGGTTACGA GGTCGGTACG CGCAATATCG TCGACGTGCT CGATGCCGAG CAAAGCCTGT ACCAGGCCAT CGCCGACTAT GCCGATGCGC GTTACACCTA TGTCACCGAC ATGGTCGAGT TGCGCCAGCA GGCGGGCGTG CTGGATACCA ACGTCATTCG AGAACTCAAC CAGTGGCTGG TCGAGAGCCA GAACGTCACG TTGCGTTTGC CGGAAGATGG CGGGATGGGC GCCATGCAGG ACATCGGCGA ACGCCCCTCG ATGGCGCCGG CCCCCTCGAC CTCACCCTGA
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Protein sequence | MSSREPSSPK SRLRLLPMLI AAAAAAPVQA ADLWTITQDA LQNNATLGAS LSTFQSVEAG RDVARGSLLP QIDATAQVAH NNSLESQSSS LSQGTGGTTS GGESSYNSTS AGLELTQALY DATSWAALEI AKRETDQQAL LLQADRQQLL YDVASAYFEI LRAHEVLEAR ISQEKAIQRQ LDQAQEQFDV GLVAVTDVNE AQASYDLARA QRISAENDLQ VSFEALERLT GKRYDSIDAL SDDLPIESPE PAGRDNWIQM AIANNPNVQA AQAAVSVSRA EVDQAEAGHK PTLSAFANYN YTDSDQDYLD GHNEDTQVGL QATLPIYSGG TTSAQVRQQT YSLEATQYDF EAQRRDTTQQ VRSLFTQVMN DVESVDAQRQ AIVSNRSALE ATRSGYEVGT RNIVDVLDAE QSLYQAIADY ADARYTYVTD MVELRQQAGV LDTNVIRELN QWLVESQNVT LRLPEDGGMG AMQDIGERPS MAPAPSTSP
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