Gene Csal_2630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2630 
Symbol 
ID4028158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2942066 
End bp2943535 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content65% 
IMG OID637967838 
ProductType I secretion outer membrane protein, TolC 
Protein accessionYP_574676 
Protein GI92114748 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCTC GAGAGCCGTC ATCGCCGAAA TCTCGGCTGC GTCTGTTACC GATGCTGATC 
GCCGCCGCCG CGGCCGCCCC GGTGCAGGCC GCCGACCTGT GGACCATCAC GCAGGACGCC
CTGCAGAACA ACGCTACCCT GGGGGCGTCG CTGTCGACCT TTCAGAGCGT CGAGGCCGGA
CGTGACGTGG CGCGGGGCAG CCTGCTGCCG CAGATCGACG CGACCGCCCA GGTTGCACAC
AACAACAGCC TGGAAAGCCA GAGCAGTTCC CTCAGCCAAG GCACGGGCGG TACGACTTCG
GGGGGCGAAA GCAGCTACAA CTCGACGAGC GCGGGCCTCG AGTTGACCCA GGCGCTGTAC
GACGCCACGA GCTGGGCCGC GCTGGAGATC GCCAAGCGCG AGACGGACCA GCAAGCGCTG
TTGCTGCAGG CCGATCGTCA GCAGTTGCTC TATGATGTCG CCTCGGCATA TTTCGAGATC
CTGCGCGCGC ATGAAGTGCT GGAAGCGCGC ATTTCGCAGG AAAAGGCTAT TCAGCGTCAG
CTCGATCAGG CTCAGGAACA GTTCGACGTC GGCCTGGTGG CGGTGACCGA TGTCAACGAG
GCGCAGGCCT CCTATGACCT GGCAAGGGCG CAGCGCATCT CGGCCGAGAA CGACCTGCAG
GTCAGCTTCG AAGCCCTGGA GCGCCTGACC GGGAAGCGCT ACGACAGCAT CGATGCCCTG
TCGGACGATC TTCCCATCGA GTCCCCCGAG CCGGCAGGGC GTGACAACTG GATTCAGATG
GCCATCGCCA ACAATCCCAA CGTCCAGGCA GCCCAGGCAG CGGTGAGCGT CTCGCGCGCC
GAGGTCGACC AGGCGGAGGC GGGGCACAAG CCGACGCTCT CGGCGTTCGC CAACTACAAC
TACACGGACA GCGATCAGGA TTACCTGGAC GGGCATAACG AGGACACCCA GGTCGGCCTG
CAGGCCACGC TGCCGATCTA CAGCGGCGGC ACGACCAGCG CACAGGTGCG TCAGCAGACC
TACTCGCTGG AGGCCACGCA ATACGATTTC GAGGCCCAGC GCCGGGATAC CACCCAGCAG
GTGCGCTCGT TGTTCACCCA GGTCATGAAC GACGTCGAAA GCGTCGACGC CCAGCGTCAG
GCGATCGTCT CCAACCGTAG CGCGCTGGAA GCGACCCGTT CCGGTTACGA GGTCGGTACG
CGCAATATCG TCGACGTGCT CGATGCCGAG CAAAGCCTGT ACCAGGCCAT CGCCGACTAT
GCCGATGCGC GTTACACCTA TGTCACCGAC ATGGTCGAGT TGCGCCAGCA GGCGGGCGTG
CTGGATACCA ACGTCATTCG AGAACTCAAC CAGTGGCTGG TCGAGAGCCA GAACGTCACG
TTGCGTTTGC CGGAAGATGG CGGGATGGGC GCCATGCAGG ACATCGGCGA ACGCCCCTCG
ATGGCGCCGG CCCCCTCGAC CTCACCCTGA
 
Protein sequence
MSSREPSSPK SRLRLLPMLI AAAAAAPVQA ADLWTITQDA LQNNATLGAS LSTFQSVEAG 
RDVARGSLLP QIDATAQVAH NNSLESQSSS LSQGTGGTTS GGESSYNSTS AGLELTQALY
DATSWAALEI AKRETDQQAL LLQADRQQLL YDVASAYFEI LRAHEVLEAR ISQEKAIQRQ
LDQAQEQFDV GLVAVTDVNE AQASYDLARA QRISAENDLQ VSFEALERLT GKRYDSIDAL
SDDLPIESPE PAGRDNWIQM AIANNPNVQA AQAAVSVSRA EVDQAEAGHK PTLSAFANYN
YTDSDQDYLD GHNEDTQVGL QATLPIYSGG TTSAQVRQQT YSLEATQYDF EAQRRDTTQQ
VRSLFTQVMN DVESVDAQRQ AIVSNRSALE ATRSGYEVGT RNIVDVLDAE QSLYQAIADY
ADARYTYVTD MVELRQQAGV LDTNVIRELN QWLVESQNVT LRLPEDGGMG AMQDIGERPS
MAPAPSTSP