Gene Csal_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2500 
Symbol 
ID4026906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand- 
Start bp2809560 
End bp2810201 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID637967707 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_574546 
Protein GI92114618 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.106725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTCG ATGCTCAGTT CTGGTCGTTT CTCGTCGCCA TCACGCTCCT CACGCTGACG 
CCGGGCGTGG ATACGCTGCT CGTCATACGC AACACCTCGC GAGGGGGCGT GCGCGATGGC 
GTGCTGACCA GCGTGGCCAT ATGCTCCGGC CTGTTCGTGC ATGCCACGGT ATCGGCATTG 
GGCATTTCCT TGATCCTTCT GCAATCGGCA TGGGCGTTCA GCGCTCTCAA GCTGGTGGGG 
GCCGGTTATC TGGTGTGGCT GGGGCTCAAG AGTCTGGCCA GCGCCCGGCG TGGCGGCGGT 
TTACCGGTGG CCGAGGTGGG TGTCGAGCGC CAGCGCGTGC CGGCCTGGCT CTCGCTGCGG 
GAGGGCTTTC TCTCCAATGT GCTCAACCCC AAGACGGTCG TGTTCTACAT GGCATTCCTG 
CCGCAGTTCA TCGCGCCGGG CGATCCGGCG TTGCTCAAGT CGCTGTGGCT GGCGGGCGTG 
CATTTCGTGA TCGCCAATCT ATGGCAGGTC GGCATCGTGC TGATGGTGGG CGGTGCCGCC 
CGCTGGCTCG CCAAGGGCTG GGTATCGCGC ATGATGGAGG GCACCACCGG CGCGGTGCTG 
GTGCTGTTCG GGGTGAAGCT GGCGTTGGCG CAGCGACCCT GA
 
Protein sequence
MFFDAQFWSF LVAITLLTLT PGVDTLLVIR NTSRGGVRDG VLTSVAICSG LFVHATVSAL 
GISLILLQSA WAFSALKLVG AGYLVWLGLK SLASARRGGG LPVAEVGVER QRVPAWLSLR 
EGFLSNVLNP KTVVFYMAFL PQFIAPGDPA LLKSLWLAGV HFVIANLWQV GIVLMVGGAA 
RWLAKGWVSR MMEGTTGAVL VLFGVKLALA QRP