Gene Csal_2406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2406 
Symbol 
ID4026843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2699364 
End bp2701322 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content67% 
IMG OID637967608 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_574452 
Protein GI92114524 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCCGA TGCGTCATGC CATTTGCCAC GAGCCGCTCG TCTTCATGTC CGATACACGC 
CGTTTCCCCC TTCCCGTGCG GCCGCGCACG CTGCTCGTGC TGGCCGCGAT CGCCGGCCTG
CTCGTCTGCA TGTGGCAGAC GGCACGCCTG GCCCGTGAGC AGGCGCTGCA GGAGCTGCGC
CACGATGCCG AGAACGAACT GCGTCTGTCG GCTGCGAGCC TCGTCGGTCA TCTCTCGCGT
CACGATTATC TGCCGGAACT GCTAGCCTCG CGGGAAATGG TCAAGCGCTT CCTGAACGAC
CCCGACGGGC AGGACTCGAT GCCCTTGAAT CGCCTGCTGG ATCGCTTTCG CGCCACCGCC
AACGTCTCCG ACATCTACCT GCTCGATCAT ACCGGCGAAA CCCTGGCGGC CAGCAACTGG
CATCGTCGCG ATACCTTCAT CGGGCAGAAC TACGGCTTCA GACCCTACTA CCGGGAAGCC
ATGGACGGCA AGAACGGCAG TTTCTACGGC CTGGGCACCC AGTCGCGGGA TCGCGGCTAC
TACTTCTCGG CCCCGGTGTG GCTCGACGAC ACGGCGCCGA ACGCGCGCCC GGACGGTGTC
ATGGTGCTCA AGGTCCTGCT CGATGCGGTG GAAGCCGGAT GGGCCGAGCA GGACGCGGAG
CTTCTGGTCA CCGACCGCAA TGGCGTCATC TTCATGGCCA GCCGGCCCGA ATTGCGTTTG
ACCACCATGG CGCCGCTGAC TCGGGCACAA CGTCAGACCA TCGCCGCCTC TCGGCGCTAC
GGCGATGCCC CGCTGCCGCC AGCGGGCCTG CGCGAGGACC AGCGACACGA TGCCCGCACA
CGCCTGGTGA GCTTCGCCTC CGGTTCCCTG GAAGGCAGGC GTTATCTGAG CCTGACGCGC
CCCATGGAAG ATTTCGATTG GCACATTCAC ATCCTCAAGC CGCTGACGCC GGTCAATCAG
GCGCAGTGGC TGGCGGCGCT GCTTGCCGGC GGTCTCTACG GGCTCATCGC CCTGGGGGCC
GGGATCGGAT GGCAGCGCCT GCGTCTGCGA CGTGAGCGCG AGCGCTTCGC CGAACGCGAG
CGACGCACCC TCGCCCAGGC CCGCGACGAA CTCGAACGGC ACGTGGAAAG CCGTACCCGT
GACCTGGTCG CCACCAATCG GCGTCTGTCG GCGGAGATCG AGGAACGCCG CCGCGCCGAG
GAAAGCCTGC GCGCCACCCG CGACGAGCTG GTGCAAGCCG CCAAGCTGGC CGTGCTCGGG
CAACTGGCGG CGGGCATCAA TCACGAGCTC AACCAGCCCT TGGCGGCGAT TCGTGCCTAC
ACCGAGAATG CTCGCGCCTT CATCGCCCGC CAGCGACACG AGGCCGCCGA TGCCAACCTC
GCCCAGGTAC TCGAGCTGAC CGAGCGCATG GCCGAGATCA GCGCGCAGCT GCGCCAGTTC
TCGCGCAAGA GCGGCGACAA CCTGACGGCG GTTTCCGTCG CGTCGTGCTT TGCGTATGCA
TTGCGCCTGT TTCAGTCGCG GATTCACGAA AGCGGCGTGC GGGTCGAGCA GCACTGGCCC
GAGCAGGCGG TGTGGGTACG CGCCGACCCG GTGCGCCTCG AGCAGGTGCT GGTCAACCTG
ATCGGCAACG CGCTCCAGGC CATGAACGAT ACCGCCGCCC CTTGCCTGAC CCTCGCCATC
GTTGCCGAAT CCACGACCGT GTACCTGGAT GTCGCCGACA ATGGCCCCGG CATCGACGAG
GCACGCCTGG CCCAGATCTT CGAACCGTTC TATACCACCA AGTCGATGGG CAGCGGCTTG
GGGTTGGGCC TGTCGATCTC GCGACGTATC GTCGAGGATC TCGATGGCCA GCTCGACGCC
TGCAACTTGC CCGGCGGCGG CGCACGCTTT CGTGTCCGGC TGCCGCGTAT CGCGGATCCC
AACGATCCCG CACGACTCGA GGACCCCGCT CATGCATGA
 
Protein sequence
MAPMRHAICH EPLVFMSDTR RFPLPVRPRT LLVLAAIAGL LVCMWQTARL AREQALQELR 
HDAENELRLS AASLVGHLSR HDYLPELLAS REMVKRFLND PDGQDSMPLN RLLDRFRATA
NVSDIYLLDH TGETLAASNW HRRDTFIGQN YGFRPYYREA MDGKNGSFYG LGTQSRDRGY
YFSAPVWLDD TAPNARPDGV MVLKVLLDAV EAGWAEQDAE LLVTDRNGVI FMASRPELRL
TTMAPLTRAQ RQTIAASRRY GDAPLPPAGL REDQRHDART RLVSFASGSL EGRRYLSLTR
PMEDFDWHIH ILKPLTPVNQ AQWLAALLAG GLYGLIALGA GIGWQRLRLR RERERFAERE
RRTLAQARDE LERHVESRTR DLVATNRRLS AEIEERRRAE ESLRATRDEL VQAAKLAVLG
QLAAGINHEL NQPLAAIRAY TENARAFIAR QRHEAADANL AQVLELTERM AEISAQLRQF
SRKSGDNLTA VSVASCFAYA LRLFQSRIHE SGVRVEQHWP EQAVWVRADP VRLEQVLVNL
IGNALQAMND TAAPCLTLAI VAESTTVYLD VADNGPGIDE ARLAQIFEPF YTTKSMGSGL
GLGLSISRRI VEDLDGQLDA CNLPGGGARF RVRLPRIADP NDPARLEDPA HA