| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2328 |
|---|
| Symbol | |
|---|
| ID | 4026287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2617503 |
|---|
| End bp | 2618189 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637967533 |
|---|
| Product | ribulose-5-phosphate 3-epimerase |
|---|
| Protein accession | YP_574377 |
|---|
| Protein GI | 92114449 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
|---|
| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.377828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATT TCAAGATTGC TCCTTCGATC CTTTCCGCCG ATTTCGCGCG CCTGGGCCAG
GAAGTGGACG ATGTCCTGGC GTCGGGGGCG GATATCGTCC ACTTCGATGT CATGGACAAT
CACTACGTCC CCAACCTCAC CATCGGGCCG ATGGTCTGCG AGGCATTGCG CAAGCACGGC
GTTACCGCCC CCATCGATGC GCACCTGATG GTCAAGCCGG TGGATCGCTT GATCGGTGAC
TTCATCGATG CCGGCGCCAG CTACATCACC TTTCATCCCG AGGCATCGGA GCATATCGAC
CGCTCGCTGC AGCTGATCCG CGACGGCGGT TGCAGGGCCG GCCTGGTCTT CAATCCCGCG
ACACCGCTTG CCTACCTCGA TCATGTCATG GACAAGCTCG ACATGGTGTT GTTGATGAGC
GTCAATCCGG GCTTCGGGGG GCAGTCCTTC ATCCCCGGCA CGCTCGACAA GCTGCGCGAG
GTGCGTCAGC GCATCGATGC CAGCGGGCGC GACATTCGCC TGGAGGTCGA TGGTGGCGTC
AAGGTCGACA ACATCGCCGA GATCGCGCGC GCAGGCGCCG ATACCTTCGT CGCCGGGTCG
GCGATCTTCA AGGCGCGCGA CGAAGCGGAT CCGCACCGCT ACGACTCCGT CATGCGTGCC
TTTCACGACG CCTTGGCGCA GCGCTGA
|
|---|
| Protein sequence | MPDFKIAPSI LSADFARLGQ EVDDVLASGA DIVHFDVMDN HYVPNLTIGP MVCEALRKHG
VTAPIDAHLM VKPVDRLIGD FIDAGASYIT FHPEASEHID RSLQLIRDGG CRAGLVFNPA
TPLAYLDHVM DKLDMVLLMS VNPGFGGQSF IPGTLDKLRE VRQRIDASGR DIRLEVDGGV
KVDNIAEIAR AGADTFVAGS AIFKARDEAD PHRYDSVMRA FHDALAQR
|
|---|
| |